Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr4g0482 ATGGCTTCCAACGATCTCAAACATCGAATCACACCCAATCCAGGTCCAGACACTATGAACGACAAGAAGAAAAGAAGGGACAAGCGAATGGTGATGGCCAAACGCGGCCTCAGGTCACTCGCCATAGCCGTTTTTCTCCCTCTCTCTCTCACTGTCTTATCAGCTTGCATAGGCTCTTCCATGCACAGCCAGTCACGTGCACATGATGCTGTCACGTGGAGAAAGCCCTTCTGGTTCCCACCCTCGTGGGCTCTGCACCTCACATGCCCGGCTTCCAGCTTCTTGATGGGTCTCTCGGCTTGGATGGTGTGGGCAGATGGGGGATTCCACAGAAACCCCATGGCTCTATTGCTTTACTTCACTCAGCTTCTCTTCACTGTGCTTTGGGATCCCATTGTGTTGGGGGCTGGGGCAACCAGAGTTGGCTTGATGGTGTGTTTTGGATTGTTTCTGAGCCAGGTTGGGTGCATGCGTGTATTTCGCCCCATCAATCCGATCGCCGGTGATTTGATAAAACCTTGTTTGCCATGGATTGCTTTTCTCTTTATTGTAAATCTCAAGCTCCTTTTTGTTTGA 576 0.5069 MASNDLKHRITPNPGPDTMNDKKKRRDKRMVMAKRGLRSLAIAVFLPLSLTVLSACIGSSMHSQSRAHDAVTWRKPFWFPPSWALHLTCPASSFLMGLSAWMVWADGGFHRNPMALLLYFTQLLFTVLWDPIVLGAGATRVGLMVCFGLFLSQVGCMRVFRPINPIAGDLIKPCLPWIAFLFIVNLKLLFV* 192
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr4g0482 191 Pfam TspO/MBR family 51 189 IPR004307 GO:0016021
Apr4g0482 191 PANTHER PERIPHERAL-TYPE BENZODIAZEPINE RECEPTOR 18 188 IPR004307 GO:0016021
Apr4g0482 191 PIRSF PBR 29 191 IPR004307 GO:0016021
Apr4g0482 191 Gene3D TspO/MBR protein 38 190 IPR038330 -
Apr4g0482 191 PANTHER TSPO/MBR-RELATED PROTEIN-RELATED 18 188 - -
Apr4g0482 191 MobiDBLite consensus disorder prediction 1 28 - -
Apr4g0482 191 CDD TSPO_MBR 74 186 IPR004307 GO:0016021
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr4g0482 Apr-Chr4 4025634 4026395 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr4g0482 K05770 - gmx:100785785 280.026