Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr4g0473 ATGGCCACCCTCTCCGCTTGCGCTTCACCACCTTGGCCAAACCCTAACCCTACGCCCAATTCAAATCCAAACCCTGATTTTCTTCCCGACCAATCCCAAACACTCGATTTCGATTCCCTTATGCCTCCCCAACCTCAATCCCCACTCAATCACTCCCCCACTGCCTCGCCGGAATCTTCCCCCCCTCCGCTGCCGCTGCCATCGCTCCTTCATCTCTCCTTCAACCAAGACCATGCTTGCTTCGCCGCTGCCACTGACAACGGCTTCCGCATCTACAACTGTGACCCGTTCCGGGAGCTCTTCCGCCGCGAGTTCGACGGCGGGGGAATCGGCCACGTGGAGATGCTCTTCCGGTGCAACATATTGGCACTCGTCGGCGGCGGGTCCCACCCTCAGTACCCTCCCAACAAGGTCATGATCTGGGACGATCACCAGGGCAGGTGCATTGGGGAGTTATCGTTTCGCGCTGCCGTTCGCGGCGTTCGGCTCCGGCGAGACCGAATAATCGTGGTGGTGGAGCAGAAGATATTCGTGTACAACTTCGCTGACCTTAAGCTCTTGCACCAAATTGAGACCGTTGCGAACCCTAAGGGGCTCTGCGTGGTTTCGCAATTGTCAGATTCTCTTGTCCTAGCGTGCCCTGGTTTGCATAAGGGTCAGATTCGCATTGAGCACTATGCGCAGAAGAAGACCAAGTTCATCTCGGCGCATGATTCCAGAATTGCATGTTTCGCACTCACTCTTGATGGGCAGTTAATCGCCACTGCCAGCACCAAGGGTACGCTGATTCGGGTTTTCGATACGGATCATGGCACGCTACTTCAGGAAGTGAGAAGAGGTGCAAATGCAGCAGAGATATATAGTTTGGCATTCTCTTCTACTGCTCAGTGGTTAGCAGTTTCAAGTGACAAGGGTACTGTCCATGTTTTCAGCCTTAAGGTTAATTCTTGTGTCCCTGAGCATGAAAAGTCACAAAGTTCATCCAATTCTGATGCTGCCATTACCCCATCTAACTCGTCCCGCTCCTTCATTAAATTTAAAGGAGTGTTGCCCAAATATTTCAATTCTGAGTGGTCAGTTGCTCAGTTTCACTTACAAGAAGGTTCTCATTACACAGTTGCATTTGGTCTCCAAAAGAATACAGTCATAATTCTTGGCATGGATGGAAGCTTTTATCGATGCCAATTTGATCCAGGGCATGGAGGGGAGATGACTCAACTGGAATATCATAACTTTCTAAAGCCAGAAACAGTCTTGTGA 1260 0.5095 MATLSACASPPWPNPNPTPNSNPNPDFLPDQSQTLDFDSLMPPQPQSPLNHSPTASPESSPPPLPLPSLLHLSFNQDHACFAAATDNGFRIYNCDPFRELFRREFDGGGIGHVEMLFRCNILALVGGGSHPQYPPNKVMIWDDHQGRCIGELSFRAAVRGVRLRRDRIIVVVEQKIFVYNFADLKLLHQIETVANPKGLCVVSQLSDSLVLACPGLHKGQIRIEHYAQKKTKFISAHDSRIACFALTLDGQLIATASTKGTLIRVFDTDHGTLLQEVRRGANAAEIYSLAFSSTAQWLAVSSDKGTVHVFSLKVNSCVPEHEKSQSSSNSDAAITPSNSSRSFIKFKGVLPKYFNSEWSVAQFHLQEGSHYTVAFGLQKNTVIILGMDGSFYRCQFDPGHGGEMTQLEYHNFLKPETVL* 420
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr4g0473 419 MobiDBLite consensus disorder prediction 1 68 - -
Apr4g0473 419 Pfam WD domain, G-beta repeat 280 310 IPR001680 GO:0005515
Apr4g0473 419 PANTHER WD REPEAT PHOSPHOINOSITIDE-INTERACTING-LIKE PROTEIN 21 419 - -
Apr4g0473 419 MobiDBLite consensus disorder prediction 25 45 - -
Apr4g0473 419 MobiDBLite consensus disorder prediction 46 68 - -
Apr4g0473 419 SUPERFAMILY WD40 repeat-like 67 323 IPR036322 GO:0005515
Apr4g0473 419 Gene3D - 66 400 IPR015943 GO:0005515
Apr4g0473 419 SMART WD40_4 270 311 IPR001680 GO:0005515
Apr4g0473 419 SMART WD40_4 59 93 IPR001680 GO:0005515
Apr4g0473 419 SMART WD40_4 227 267 IPR001680 GO:0005515
Apr4g0473 419 MobiDBLite consensus disorder prediction 10 24 - -
Apr4g0473 419 PANTHER WD-REPEAT PROTEIN INTERACTING WITH PHOSPHOINOSIDES WIPI -RELATED 21 419 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr4g0473 Apr-Chr4 3978641 3982336 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr4g0473 K22991 - gmx:100781692 724.546