Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr4g0461 ATGAGTAGCTTAACGGCGAGCTTCACACCTCGAATATGTGGCACACGTCGCAACCTACTCCCAATACGACACCGTCCCCTTCATCATTTCACCAACAGACGCGTCACCACCACTCTCACACTGCCAAGAATCGTTTGCATGGCGGAACCTTATCTCATAACGAAGCTTGAGTCCGCTGAGAAAACATGGAAAGAGTTATCGGTGAAGCTTGCTGATCCGGACATCGTGTCTAACCCTAGCGAGTACCAGAAGTTGGCACAATCAGTGGCGGAGCTTGATGTGGTTGTGTCTACGTACAAGAGATTTAAAGACTGTGAAAAGCTTCTAGAAGAAACCAAAGCCTTAGCGAAGGATGATGGCAACGATGAGGATATGGCGGCAATGATATCTTATGAAATCGACTCTTTGTCCAAGCAACTCTCTGAGCTTGAGGACAAACTTAAGGTATTACTTCTTCCCAGTGATCCTCTGGATGCAAGAAACATAATGCTTGAAGTACGAGCAGGTACTGGGGGTGACGAGGCTGGAATATGGGCTGGTGATCTTGTCCGAATGTATGAAAAATATAGTGAACGGAATTCTTGGAAGTTTTCTCCTGTCTCGAGCTCTGAGGCAGAGAAAGGAGGATACAAAACTTATGTGATGGAGATAAAAGGGAATCGTGTTTACAGTAAATTGAAATATGAATCTGGTGTCCACCGAGTTCAACGTGTTCCTCTAACAGAAACACAAGGTCGTGTACATACTTCTACTGCAACAGTGGCCATCATGCCAGAGGCTGATGAAGTTGAAGTTGTAATTGACCCAAAAGATATTGAACTGACAACAGCACGTTCTGGGGGTGCTGGAGGGCAGAATGTTAACAAGGTTGAAACAGCCATTGATCTTTTCCATAAGCCAACAGGAATCCGCATCTTTTGTACTGAAGAAAGGACACAACTTCAGAACAAGAATCGTGCTTTTCAATTGCTCCGAGCAAAACTGTATGAGATGAAGGTAAGGGAGCAGCAAGAGTCAATACGAAATCAAAGGAAATTACAGGTTGGTACAGGTGCACGTGCAGAAAAAATTCGGACATACAATTATAAGGACAACAGGGTTACTGACCACAGATTGAAGATGAACTTTGAGCTCACCTCTTTTCTTGAAGGTGATATTGAAGATGCTGTTCAGTCTTGTGTTACAATGGAGCAAAAGGAACTTCTGGAAGAACTTGCTGAATCTATAGGTGCACCTGCTAGCTGA 1245 0.4418 MSSLTASFTPRICGTRRNLLPIRHRPLHHFTNRRVTTTLTLPRIVCMAEPYLITKLESAEKTWKELSVKLADPDIVSNPSEYQKLAQSVAELDVVVSTYKRFKDCEKLLEETKALAKDDGNDEDMAAMISYEIDSLSKQLSELEDKLKVLLLPSDPLDARNIMLEVRAGTGGDEAGIWAGDLVRMYEKYSERNSWKFSPVSSSEAEKGGYKTYVMEIKGNRVYSKLKYESGVHRVQRVPLTETQGRVHTSTATVAIMPEADEVEVVIDPKDIELTTARSGGAGGQNVNKVETAIDLFHKPTGIRIFCTEERTQLQNKNRAFQLLRAKLYEMKVREQQESIRNQRKLQVGTGARAEKIRTYNYKDNRVTDHRLKMNFELTSFLEGDIEDAVQSCVTMEQKELLEELAESIGAPAS* 415
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr4g0461 414 PANTHER PEPTIDE CHAIN RELEASE FACTOR APG3, CHLOROPLASTIC 26 412 - -
Apr4g0461 414 Gene3D - 331 412 - -
Apr4g0461 414 ProSitePatterns Prokaryotic-type class I peptide chain release factors signature. 278 294 IPR000352 GO:0003747|GO:0006415
Apr4g0461 414 Coils Coil 126 146 - -
Apr4g0461 414 Gene3D - 269 330 - -
Apr4g0461 414 TIGRFAM prfA: peptide chain release factor 1 48 407 IPR004373 GO:0006415|GO:0016149
Apr4g0461 414 Gene3D - 158 268 - -
Apr4g0461 414 Gene3D - 46 156 - -
Apr4g0461 414 Pfam PCRF domain 60 254 IPR005139 GO:0006415
Apr4g0461 414 PANTHER LD18447P 26 412 - -
Apr4g0461 414 SMART PCRF_a_2 114 229 IPR005139 GO:0006415
Apr4g0461 414 Hamap Peptide chain release factor 1 [prfA]. 52 406 IPR004373 GO:0006415|GO:0016149
Apr4g0461 414 Pfam RF-1 domain 261 371 IPR000352 GO:0003747|GO:0006415
Apr4g0461 414 SUPERFAMILY Release factor 61 402 IPR045853 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr4g0461 Apr-Chr4 3872908 3878197 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr4g0461 K02835 - gmx:100777225 744.577