Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr4g0458 ATGGATGTGGTGACAACATTGACAGCTGACAAACCAGTTGTGATCTTCAGCAAGAGCACTTGTTGCATGAGCCATACTGTGAAGGCTCTCATATGCGGCTTTGGTGCCAACCCTGCAGTTATTGAGGTAGACAAAATGCCTAGAGGACAACAAGTAGAGAGAGCATTACTCCAACTTGGTTGCAGCCCAAGTGTACCTGCAGTGTTCATTGGACAACAATTCATAGGTGGTGCTGATGAAATCATAAGCCTCAACGTTCAAAACAAGCTTGCCCAATTGCTTCTCAGGGCTAAAGCTATATTCATCTAG 309 0.4498 MDVVTTLTADKPVVIFSKSTCCMSHTVKALICGFGANPAVIEVDKMPRGQQVERALLQLGCSPSVPAVFIGQQFIGGADEIISLNVQNKLAQLLLRAKAIFI* 103
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr4g0458 102 ProSiteProfiles Glutaredoxin domain profile. 1 101 - -
Apr4g0458 102 Pfam Glutaredoxin 13 75 IPR002109 -
Apr4g0458 102 Gene3D Glutaredoxin 2 101 - -
Apr4g0458 102 PANTHER GLUTAREDOXIN 1 102 IPR011905 -
Apr4g0458 102 PRINTS Glutaredoxin signature 13 31 IPR014025 -
Apr4g0458 102 PRINTS Glutaredoxin signature 58 71 IPR014025 -
Apr4g0458 102 PRINTS Glutaredoxin signature 72 85 IPR014025 -
Apr4g0458 102 TIGRFAM GlrX-like_plant: glutaredoxin-like family 5 101 IPR011905 -
Apr4g0458 102 CDD GRX_GRXh_1_2_like 12 93 - -
Apr4g0458 102 PANTHER MONOTHIOL GLUTAREDOXIN-S2 PROTEIN 1 102 - -
Apr4g0458 102 SUPERFAMILY Thioredoxin-like 2 99 IPR036249 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr4g0458 Apr-Chr4 3859279 3859587 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr4g0458 1 102 Miscellaneous Gene Families AT4G15700 48.039 2.71e-36 117
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr4g0458 K03676 - gmx:100803979 185.267
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr8g0165 8 1259779 1260087 Apr4g0458 4 3859279 3859587 PCT