Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr4g0457 ATGGACACGATTACAAGCATGGTAGCTGATAAGCCTGTGGTGATATTCAGCAAGAGCACATGTTGCTTGAGCCACTCCATGACATCATTGATACGTAGCTTTGGCGCAAATCCCACTGTTCATGAGCTTGATGAAATGGCGAATGGGAAACAGATTGAAAGTGCATTGCTCCAAATGGGATGCCAACCAAGTGTTCCTGCTGTGTTTATAGGACAAAGGTTCATAGGTGGATCCAAAAAAATCATGAGCTTGCATGTCCGCAATGAATTAGTACCACTGCTCAAGAATGCTGGGGCTATATGGATTTGA 309 0.4401 MDTITSMVADKPVVIFSKSTCCLSHSMTSLIRSFGANPTVHELDEMANGKQIESALLQMGCQPSVPAVFIGQRFIGGSKKIMSLHVRNELVPLLKNAGAIWI* 103
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr4g0457 102 Gene3D Glutaredoxin 1 101 - -
Apr4g0457 102 PANTHER MONOTHIOL GLUTAREDOXIN-S2 PROTEIN 1 101 - -
Apr4g0457 102 PRINTS Glutaredoxin signature 13 31 IPR014025 -
Apr4g0457 102 PRINTS Glutaredoxin signature 58 71 IPR014025 -
Apr4g0457 102 PRINTS Glutaredoxin signature 72 85 IPR014025 -
Apr4g0457 102 SUPERFAMILY Thioredoxin-like 1 101 IPR036249 -
Apr4g0457 102 CDD GRX_GRXh_1_2_like 12 93 - -
Apr4g0457 102 TIGRFAM GlrX-like_plant: glutaredoxin-like family 5 102 IPR011905 -
Apr4g0457 102 Pfam Glutaredoxin 13 75 IPR002109 -
Apr4g0457 102 PANTHER GLUTAREDOXIN 1 101 IPR011905 -
Apr4g0457 102 ProSiteProfiles Glutaredoxin domain profile. 1 101 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr4g0457 Apr-Chr4 3853583 3854113 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr4g0457 1 102 Miscellaneous Gene Families AT4G15700 51.961 6.51e-42 131
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr4g0457 K03676 - gmx:100789514 198.749
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr4g0457 4 3853583 3854113 Apr8g0165 8 1259779 1260087 PCT
Apr8g0167 8 1275382 1275976 Apr4g0457 4 3853583 3854113 PCT