Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr4g0456 ATGGTATCGTTAGACGGCCACATTATTTTATTTCTCGTTATGATGATTGGATTTTTATGCTTTTTTATTAAGATGTTCTCATTGATTTTGAAAATTAGGGTTTCTCCAATGGAGGATACCCCAGAAATTGAGGCGAAGTCACATGAAGAAGTGATTTTGGACAAAACAGCTGAGAAGAAGCAGGAAACGCTTGATGAAGTTCTTTCACGACACAGGAAAGAGATATCACAGCTGCAGAAAAAGGAAGTTGAGATGAAAAAGGCTGCAGCTCGAGGTAGCAAGGCTGAGCAGAAAGCTAAGAAGAAGCAAGTGGAGGAAGAGGTTTCCCAACTTTCTGCTAAGCTTAAGGAGAAACAAGCCAAAGAACTGGCTGCCTTAGGCTATAACAGTGGCAATGGAAACGAAAAGAGCAATTTGGACAGTTTGGTGAAGGCCATAGCTGGAGTATCTGTTACTAGTCAACCTGAGCATACAAAGGTCAGCAAGGCAAAACAGAGGCGAGACAAGAAAGCTCAACAAGAAGTAGAAAGGGAGCAGAGAATCCAAGCAGAGCAGAGTGACATTATAAGCGATCGAGAAATTGAAAATGAGAAATTGGAAAGGAAATTGAAGCCTCTAGGTTTGACTGTTTGTGAAATAAAGCCTGATGGGCACTGCCTCTATAGAGCTGTTGAGGATCAGCTGGCCCTCCTCTCCGGGGGTAGTTCTCCTTATACATACCAAGAACTCCGAGAAATGGTGGCCACATACATGAGAAAGCATACATCTGATTTCCTTCCATTTTTCCTGTCAGAGAATTTGATTGGAAGTGATTCTGATGAATCACCTGCTCAGAAGTTTGAAAATTATTGTAAAGAAGTGGAGTCCACGGCAATATGGGGAGGACAACTAGAGCTTGGTGCCTTGACTCATTGCCTGAAGAAGCATATTATGATATTTTCAGGGTCCTTCCCAGATGTGGAGATGGGCAAAGAGTATAAACCTGATGATGGCACTAGCTTGTCTAATTCGAGTATCATGCTTTCTTACCATAAGCATGCTTTTGGGCTAGGAGAGCATTATAATTCTCTGGTCCCAACATGA 1083 0.422 MVSLDGHIILFLVMMIGFLCFFIKMFSLILKIRVSPMEDTPEIEAKSHEEVILDKTAEKKQETLDEVLSRHRKEISQLQKKEVEMKKAAARGSKAEQKAKKKQVEEEVSQLSAKLKEKQAKELAALGYNSGNGNEKSNLDSLVKAIAGVSVTSQPEHTKVSKAKQRRDKKAQQEVEREQRIQAEQSDIISDREIENEKLERKLKPLGLTVCEIKPDGHCLYRAVEDQLALLSGGSSPYTYQELREMVATYMRKHTSDFLPFFLSENLIGSDSDESPAQKFENYCKEVESTAIWGGQLELGALTHCLKKHIMIFSGSFPDVEMGKEYKPDDGTSLSNSSIMLSYHKHAFGLGEHYNSLVPT* 361
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr4g0456 360 Pfam OTU-like cysteine protease 214 354 IPR003323 -
Apr4g0456 360 SUPERFAMILY Cysteine proteinases 178 359 IPR038765 -
Apr4g0456 360 ProSiteProfiles OTU domain profile. 208 360 IPR003323 -
Apr4g0456 360 PANTHER OTU DOMAIN CONTAINING PROTEIN 60 358 - -
Apr4g0456 360 Coils Coil 61 121 - -
Apr4g0456 360 MobiDBLite consensus disorder prediction 153 180 - -
Apr4g0456 360 Gene3D - 194 359 - -
Apr4g0456 360 PANTHER DEUBIQUITINASE OTUD6B 60 358 - -
Apr4g0456 360 MobiDBLite consensus disorder prediction 159 180 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr4g0456 K18342 - gmx:100819977 545.814