Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr4g0453 ATGGCAGAAGGTGAGGAGCGTATTGAGCTTAAATTCCGCATATATGACGGAACTGATATAGCACACAGTACTTATTCATCTTCAACGACAATTGGTACCCTTAAGCAAAGGCTAGTTGCTGAGTGGCCTCAAGGTAAAACAGTTACACCAAAGTCAGTAAGTGACCTAAAACTTATACATGCTGGTAAATTTTTGGAAAACAGCAAAACTCTTGCTGATTCCAGAATAACTTTTGGTGACATCCCTGGAGGTGGTATTACCGTGCATGTTGTAGTACAGCCTCCAGTAACTAAAAAGAAGACAGAGAAGAATCAGGAGAACAAGCAAAAGATGAATTCCTGCTCATGCACTATCCTCTAG 360 0.4083 MAEGEERIELKFRIYDGTDIAHSTYSSSTTIGTLKQRLVAEWPQGKTVTPKSVSDLKLIHAGKFLENSKTLADSRITFGDIPGGGITVHVVVQPPVTKKKTEKNQENKQKMNSCSCTIL* 120
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr4g0453 119 PANTHER MEMBRANE-ANCHORED UBIQUITIN-FOLD PROTEIN 1 119 - -
Apr4g0453 119 Pfam Ubiquitin-2 like Rad60 SUMO-like 6 117 IPR039540 -
Apr4g0453 119 PANTHER UBIQUITIN-LIKE PROTEIN 3 HCG-1 PROTEIN 1 119 IPR040015 -
Apr4g0453 119 CDD Ubl_MUBs_plant 8 95 - -
Apr4g0453 119 PIRSF MUB 1 119 IPR017000 -
Apr4g0453 119 ProSiteProfiles Ubiquitin domain profile. 8 76 IPR000626 GO:0005515
Apr4g0453 119 SUPERFAMILY Ubiquitin-like 4 98 IPR029071 -
Apr4g0453 119 Gene3D - 1 101 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr4g0453 Apr-Chr4 3832055 3835395 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr4g0453 - - gmx:100818909 191.045