Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr4g0450 ATGAACACCCACAGCGATGTGAAGGTGGTGGAGCAGGGGCCAACCCGAGAAAGGCCTTACGATGTTTTGCTGCGTTTTCTTGCCCTCTCACTCACTCTTGTCGCCACCATCATCGTTGGCGTTGACAAAGAGACTAAGATCATTTCCTACGCTGGAATGCAATTCACAGCCACTGCTAAGTGGCAATACATGTCTGCTATTGTGTTTTTCTTGGTGTCAAATGGAATAGCATGCTCCTATGCGGGTGTTTCATTGGTGATGAGGGTGATTGGAGGAAAGAGTGGAAAAAGTAACGTAGCTGTGTTGGTGCAAAGCTTTCTAGACCTTGTGATCATGGCACTTTTGTTTTCGGCCAATGGAGCAGCCATTGCAGTGGGAGTGATAGGACAGAAGGGTAACTCGCACGTGCAATGGATGAAAGTGTGCAACGTGTTTGATGCCTATTGTCGCCATGTTACTGCCGCTTTGGTCCTCTCTCTTATTGGTTCCACTGTCTTTCTTTTGCTTATCCTTCACTCTCTCTTCAAACTCCATTACAGGTCAGCCTAA 549 0.4718 MNTHSDVKVVEQGPTRERPYDVLLRFLALSLTLVATIIVGVDKETKIISYAGMQFTATAKWQYMSAIVFFLVSNGIACSYAGVSLVMRVIGGKSGKSNVAVLVQSFLDLVIMALLFSANGAAIAVGVIGQKGNSHVQWMKVCNVFDAYCRHVTAALVLSLIGSTVFLLLILHSLFKLHYRSA* 183
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr4g0450 182 Pfam Casparian strip membrane protein domain 20 163 IPR006702 -
Apr4g0450 182 PANTHER NITRATE, FORMATE, IRON DEHYDROGENASE 2 181 - -
Apr4g0450 182 TIGRFAM A_tha_TIGR01569: plant integral membrane protein TIGR01569 23 176 IPR006459 -
Apr4g0450 182 PANTHER CASP-LIKE PROTEIN 1E1 2 181 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr4g0450 Apr-Chr4 3813672 3814897 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr4g0450 - - gmx:100784906 247.284