Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr4g0436 ATGATGCTTAGAATTCGAAGCCGCGACGGCCTGGAGCGCGTGACGGTGGAGAATCCACGCGCCACAACAGTGTCGCAACTAAAGAGCATAATCCAAACGCAGTTGGGGATTCCGGTGCAGAACCAAACCCTCTCCACCAACCAAAACCTTCTTTTAGCGAAGTCTCTTGAAGATCTCCTCCGATTCACCGACATGTCCAACCCCGACGCGCCCCTCTCTTCGCTCAACCTCTCTCACGGTTCCATCGTTTTCCTCGCCTATGACGGCGAACGGAGGGTCCCTGGCCCTGCCTTCAACCCCGCCGGCTCCTTCGGCCGCAAGATGACCATGGACGATCTCATCGCCAAGCAGATGCGCGTCACGCGCCAGGAGAATCCGCATTGCGAACTCGTCTCCTTCGACCGCGACTGCGCCAACGCGTTCCAGCACTACGTGAACGAGACGCTCGCGTTTGCAGTGAAGCGCGGTGGGTTTATGTACGGCACCGTTTCGGAGGAGGGGAGGGTGGAGGTGGACTTCATTTACGAGCCTCCCCAGCAGGGTTCTGAGGAGAATCTATTGTTTTTGAGGGACCCAGAGGAGGAAAAGTTGGTGGAGGCTATTGCTTTGGGGTTGGGTATGAGGAAGGTTGGGTTCATTTTCACTCAGACTATAAGCCAAGATAAAAAGGATTATACTTTGTCTAATAGGGAGGTTCTTCAGGCTGCGGAGTACCATGCCGAGAGTGGGTTGAAGGAGTGGGTCACTGCTGTGGTTAAGCTTGAGGTGAATGAGGATATGGGTGCTGATGTTCACTTTGAAGCCTTTCAGATGAGTGACGTGTGTGTTCGGTTGTTTAGGGAAGGGTGGTTTGAGACTGATATAAAGGAGGATGATGATCCCAAGTTGTCTAAAATGAAGAAGGATGTGGTTGTTGGAGTTAAGGATACAAGAGAAGTTGATAATGATTTCTTCTTGGTGGTTGTCAAAATCTTCGATCATCAGGGTCCTCTTTCATCAACATTTCCCATTGAGAACCGAAATACTCAAGTGGCAATGAAGGCTCTGAAGAATCACCTTGAACGAGCAAAAAATCTTCCATTTGTGAAGCGAATTTCGGATTTTCATCTTCTTCTCGTATTAGCAAGGCTTTTAGACCTGAATGCTGATGTTCCTGCATTGACAGAATGTGTGCAGACACAAAATGCTGTACCAGAAGGTTACCAGATCCTCATTGAGTCTATGGCAAACGCTGCTTGA 1239 0.4988 MMLRIRSRDGLERVTVENPRATTVSQLKSIIQTQLGIPVQNQTLSTNQNLLLAKSLEDLLRFTDMSNPDAPLSSLNLSHGSIVFLAYDGERRVPGPAFNPAGSFGRKMTMDDLIAKQMRVTRQENPHCELVSFDRDCANAFQHYVNETLAFAVKRGGFMYGTVSEEGRVEVDFIYEPPQQGSEENLLFLRDPEEEKLVEAIALGLGMRKVGFIFTQTISQDKKDYTLSNREVLQAAEYHAESGLKEWVTAVVKLEVNEDMGADVHFEAFQMSDVCVRLFREGWFETDIKEDDDPKLSKMKKDVVVGVKDTREVDNDFFLVVVKIFDHQGPLSSTFPIENRNTQVAMKALKNHLERAKNLPFVKRISDFHLLLVLARLLDLNADVPALTECVQTQNAVPEGYQILIESMANAA* 413
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr4g0436 412 PANTHER NUCLEAR PROTEIN LOCALIZATION 4 2 92 IPR016563 GO:0006511
Apr4g0436 412 PANTHER NUCLEAR PROTEIN LOCALIZATION 4 102 410 IPR016563 GO:0006511
Apr4g0436 412 ProSiteProfiles Ubiquitin domain profile. 1 85 IPR000626 GO:0005515
Apr4g0436 412 ProSiteProfiles MPN domain profile. 130 271 IPR037518 -
Apr4g0436 412 Coils Coil 339 359 - -
Apr4g0436 412 Pfam Nuclear pore localisation protein NPL4 1 85 IPR024682 -
Apr4g0436 412 CDD Ubl_AtNPL4_like 1 85 - -
Apr4g0436 412 Gene3D - 1 100 - -
Apr4g0436 412 SUPERFAMILY Ubiquitin-like 1 89 IPR029071 -
Apr4g0436 412 CDD MPN_NPL4 119 369 IPR007717 -
Apr4g0436 412 Pfam NPL4 family 158 283 IPR007717 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr4g0436 K14015 - gmx:100779549 733.406