Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr4g0414 ATGTCTAATTTCTCGAGATGGTTCTCTCGATTACGTTCTTCGTGCAACTACTTCTGCTACCGCACTCTCCACACAACAAGGAAGCCATGGTCAAGCTCTGTGCTCCCTCTCGCACTCGCTCTTTCTGCGGGTTCACTCGCACTTCAACCTCACCTCAATCCTTCCTTCTGCGATGCTCCTGATAGAGATGTGAGCTTTTGGGGCAAAGGTAGCACTCATTACGTTGTTAAGGGATCACAGAAAGGAGTTCCACGGGAGCTTCTTGAGGAGTTGAAGATCGTCTGTCAGGATAACATATCTCTTGATTACGACGAGAGATATTTCCATGGAAAACCACAGAACAGCTTTCACAAGGCTGTCAATATCCCAGATGTGATTGTTTATCCAAGATCTGAAGAGGAGGTCTCCAAGATTGTTGAACTATGTAACAATCATAAGGTTCCTATTGTACCTTATGGCGGAGCTACATCAATTGAGGGTCACACCTTATCCCCTCATGGAGGGGTTTGCATTGACATGTCATTAATGAAAAGAGTGAAAGCATTACATGTTGAGGACATGGATGTTGTTGTTGAGCCTGGAATTGGATGGATGGAGCTTAATGAATATTTGGAACCTTATGGCCTATTTTTTCCGCTTGATCCAGGTCCTGGAGCAAGCATTGGAGGCATGTGTGCTACACGCTGCTCTGGTTCGTTAGCTGTGAGGTACGGAACTATGCGCGACAATGTCATCAGTCTCAAGGTGGTTCTTGCCAATGGAGATATTGTGAAGACTGCATCTCGTGCTAGGAAGAGTGCTGCAGGGTATGATCTGACCCGCTTAATGATCGGAAGTGAAGGGACACTTGGTGTCATAACTGAAGTAACACTGCGGCTTCAGAAAATTCCCCAGTATTCAGTGGTTGCAATGTGCAATTTCCCTTCTGTGAAGGATGCAGCAAATGTTGCTATTGCCACCATGATGTCTGGTATACAGGTGTCAAGGGTAGAGCTATTGGATGAAGTTCAAGTGAAAGCTATCAATATTGCTAATGGGAAGAATTTGCCTGAATGTCCAACTTTAATGTTTGAATTTATAGGAACAGAGGCTTATGCACGTGAACAAACGCAAATTGTTCGGAAACTTGTTTCTAGGCACAATGGCTCAGATTTTGTATTTGCTGAAGAACCTGAAGCGAAAAAAGAACTTTGGAAGATAAGGAAGGAGGCACTTTGGGCGTGCTTTGCAATGGAGCCTAATCTGGAGGCAATGATATCGGACGTTTGTGTTCCTTTATCTCACCTTGCCAATTTAATTTCAAGATCTAAAAAGGAGCTGGATGCATCACCACTAGTTTGCACAGTAATTGCACATGCTGGTGATGGTAATTTCCACACGGTTATACTATTTGATCCTACTCAAGAAGAGCAGCGGCGGGAGGCAGAGAGACTCAATGAATTTATGGTTCATGCTGCCTTGTCATTGGAAGGAACTTGTACGGGTGAACATGGTGTTGGCACTGGGAAAATGAAGTATCTTGAGGAAGAACTCGGAGAGGAAGCATTGAGGACAATGAAAAAAATAAAAGCAGTGCTAGATCCCAACAATATCATGAATCCAGGAAAGCTCATCCCTCCCCATGTTTGTTTGTAG 1635 0.4416 MSNFSRWFSRLRSSCNYFCYRTLHTTRKPWSSSVLPLALALSAGSLALQPHLNPSFCDAPDRDVSFWGKGSTHYVVKGSQKGVPRELLEELKIVCQDNISLDYDERYFHGKPQNSFHKAVNIPDVIVYPRSEEEVSKIVELCNNHKVPIVPYGGATSIEGHTLSPHGGVCIDMSLMKRVKALHVEDMDVVVEPGIGWMELNEYLEPYGLFFPLDPGPGASIGGMCATRCSGSLAVRYGTMRDNVISLKVVLANGDIVKTASRARKSAAGYDLTRLMIGSEGTLGVITEVTLRLQKIPQYSVVAMCNFPSVKDAANVAIATMMSGIQVSRVELLDEVQVKAINIANGKNLPECPTLMFEFIGTEAYAREQTQIVRKLVSRHNGSDFVFAEEPEAKKELWKIRKEALWACFAMEPNLEAMISDVCVPLSHLANLISRSKKELDASPLVCTVIAHAGDGNFHTVILFDPTQEEQRREAERLNEFMVHAALSLEGTCTGEHGVGTGKMKYLEEELGEEALRTMKKIKAVLDPNNIMNPGKLIPPHVCL* 545
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr4g0414 544 Pfam FAD binding domain 123 259 IPR006094 GO:0050660
Apr4g0414 544 Gene3D - 416 497 - -
Apr4g0414 544 Pfam FAD linked oxidases, C-terminal domain 296 537 IPR004113 GO:0003824|GO:0050660
Apr4g0414 544 Gene3D - 498 538 IPR016171 -
Apr4g0414 544 SUPERFAMILY FAD-linked oxidases, C-terminal domain 300 540 IPR016164 GO:0003824|GO:0050660
Apr4g0414 544 ProSiteProfiles PCMH-type FAD-binding domain profile. 119 296 IPR016166 GO:0071949
Apr4g0414 544 Gene3D - 85 316 IPR016169 -
Apr4g0414 544 SUPERFAMILY FAD-binding/transporter-associated domain-like 91 297 IPR036318 GO:0050660
Apr4g0414 544 PANTHER D-LACTATE DEHYDROGENASE 60 540 - -
Apr4g0414 544 PANTHER D-LACTATE DEHYDROGENASE, MITOCHONDRIAL-RELATED 60 540 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr4g0414 Apr-Chr4 3530992 3540970 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr4g0414 K00102 - gmx:100803612 981.089
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr4g0414 4 3530992 3540970 Apr4g0414 4 3530992 3540970 ECH