Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr4g0402 ATGGAATCTGAAAATGGCGTTGCTGTGGAGGAAGAGAAACGTGTTATTGGGGTAACAACAAAGGAGAATGTAAAGGAAGAAGTTTCAAACGATGTTGCAGAAATTCAAAGCAAGAATGAGGTATCTAAACCCACAGTAGAGGCTGAAGGCCCCATTTCTGCTGGTGAAACTGTTGCAATTGAAGCATCAAAGACTACTTCAGCAAGTAAAAATTCCAAAAGTTGTAAGGGAGGCGGTGGTAAAGCAATTGTCGCTGCCAAGAACAATAAATCTGCCAAAGAGAAACCAATTTTGAAGGGTCTTACTTCAATGTCTGAAAAACAGAAACCAACCCTTTCTCAAAGCCTTTCTTTCCCAGCCAAATCAGTTGGTGAAGATGCTTTGCAGAAAAGCATTGATGGGTATCTTGTGAAGACAAAAGCTAAACATTTTCAAGTGAACTCACAGGCAAAAACCAACACTTGCATGCCTGGTTTGAAACGCTCTGTGTTTGGAAGGTCTACTCCAGTTACTGCAACCACCAAGAACATTACTTCTGAGCCATCGGCACCCGTTGATCAGATGTCAAACCCAGCGAAAACTGCAAAACCAAATAAGGAGGATGAAGATTCTCATTCCACAACTTCAAGTGCTACTCCTCGTCAGAGAAACAATGGTTCTGGATTTTCCTTCAGATTGGAAGAAAGAGCTGAAAAGCGGAAGGAGTTTTTCTCAAAGTTGGAGGAAAAAATTCTAGCCAAGGAAGCAGAGAAAACTAACCAACAAGCGAAATCAAAAGAAAACCAAGAGGCAGAGATTAAGCTGTTGAGGAAAAGCATGACATTCAAAGCCACTCCAATGCCTAGTTTCTATAAGGAACCACCACCAAAAGTGGAGCTGAAGAAGATACCAACAACCCGTGCAATATCCCCAAAGCTTGGAAGGCACAAAGGATCTGCTATGAACAACAATTCAGGAGAGGATAAGTCTTGCTCAAGTCCACATGGGAAACAACAACAGAATGACTCAACCAAGGCAAAGGGTCATAAAGATGTGATTTCAAAGAAACCAATCAGAAAAAGCCAAGCCAAGCTGAAGTCTCAGGAAAATGTAATCACAGGAAGCAAAGAAGAATGCGAAGATTCTCATGTTGAAAATTCTGAATGCAAAAATGAGATGGAATTACAATCTGAGACAGGTCATCCTATTCCTCCAAATAGTTCATTGCTCCTAAATTCAACTACACCTGAGCTTGTATCATATGAGGTTACTGTTGGAGTGTAG 1263 0.4109 MESENGVAVEEEKRVIGVTTKENVKEEVSNDVAEIQSKNEVSKPTVEAEGPISAGETVAIEASKTTSASKNSKSCKGGGGKAIVAAKNNKSAKEKPILKGLTSMSEKQKPTLSQSLSFPAKSVGEDALQKSIDGYLVKTKAKHFQVNSQAKTNTCMPGLKRSVFGRSTPVTATTKNITSEPSAPVDQMSNPAKTAKPNKEDEDSHSTTSSATPRQRNNGSGFSFRLEERAEKRKEFFSKLEEKILAKEAEKTNQQAKSKENQEAEIKLLRKSMTFKATPMPSFYKEPPPKVELKKIPTTRAISPKLGRHKGSAMNNNSGEDKSCSSPHGKQQQNDSTKAKGHKDVISKKPIRKSQAKLKSQENVITGSKEECEDSHVENSECKNEMELQSETGHPIPPNSSLLLNSTTPELVSYEVTVGV* 421
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr4g0402 420 MobiDBLite consensus disorder prediction 146 227 - -
Apr4g0402 420 MobiDBLite consensus disorder prediction 310 334 - -
Apr4g0402 420 MobiDBLite consensus disorder prediction 104 118 - -
Apr4g0402 420 MobiDBLite consensus disorder prediction 279 404 - -
Apr4g0402 420 MobiDBLite consensus disorder prediction 99 118 - -
Apr4g0402 420 MobiDBLite consensus disorder prediction 166 194 - -
Apr4g0402 420 PANTHER PROTEIN WVD2-LIKE 4 147 366 IPR044833 GO:0008017
Apr4g0402 420 PANTHER PROTEIN WVD2-LIKE 4 1 146 IPR044833 GO:0008017
Apr4g0402 420 PANTHER PROTEIN WVD2-LIKE 4 364 420 IPR044833 GO:0008017
Apr4g0402 420 PANTHER TPX2 (TARGETING PROTEIN FOR XKLP2) FAMILY PROTEIN 147 366 - -
Apr4g0402 420 PANTHER TPX2 (TARGETING PROTEIN FOR XKLP2) FAMILY PROTEIN 1 146 - -
Apr4g0402 420 PANTHER TPX2 (TARGETING PROTEIN FOR XKLP2) FAMILY PROTEIN 364 420 - -
Apr4g0402 420 MobiDBLite consensus disorder prediction 208 222 - -
Apr4g0402 420 MobiDBLite consensus disorder prediction 364 388 - -
Apr4g0402 420 Pfam Targeting protein for Xklp2 (TPX2) domain 222 291 IPR027329 -
Apr4g0402 420 MobiDBLite consensus disorder prediction 335 351 - -
Apr4g0402 420 Coils Coil 237 262 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr4g0402 Apr-Chr4 3434904 3437441 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr4g0402 - - gmx:100794426 594.349
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr4g0402 4 3434904 3437441 Apr8g0706 8 6784402 6788323 PCT