Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr4g0381 ATGGATATTGAGTCAATAATGCAAGCAAACAAGGCTGGGTTTTTTGCTCAATGGGGAAACAGCCTCAAGGCTTTGCCTAGGAACTCCAAGGCCATGGTTATCAACTTCACAAGGACCATAAAGAAGATTGGACAAGATGACCCCAGAAGAGTAATTCACTCATTAAAAGTGGCAATTGCTCTCACATTGGTGTCCTTGTTTTACTACTCGAGGCCTCTTTATGATGGATTCGGAGTTGCGGGAATGTGGGCTGTTTTGACAGTGGTGGTAGTATTTGAATTCACAGTAGGTGCAACCCTGAGCAAAGGTTTAAATAGAGGATGTGCTACATTATTGGCTGGTGCTTTAGGGGTTGGAGGTCAACACTTGGCTACTGCTTTTGGAGAAAGGGCAGAACCTATTGTCCTTGGGATCCTTGTCTTCATTCTAGCTGCAGGGTCAACATTTTTCAGATTTTTTCCAAAGATCAAAGCAAGATATGACTATGGGGTGGTGGTTTTTATTTTGACATTCTGTTTGATTACCGTCTCGGGGTACAGAGTGGAGCAACTCTTCGAGCTTGCCCATCAGAGACTTGCAACAATTTTAATAGGTGCAACAGCTTGCATGGTCATCTCTATTTTCATTTGTCCAGTATGGGCAGGTGAAGATCTTCACAAGTTGGTAGCTTCCAACATAGAAAAGCTAGCAAATTACCTGGAAGGATTTGAAGCAGAATATTTTCATTGCTCAGAGGATAAACAAAAACCCGAGAAGTCAGTTCTCGAAGGATATAAAAATGTTCTCAATTCCAAAGCAAGCGAGGAGTCCTTGGCAAATTTAGCAAGGTGGGAACCAGGACACGGTGGTTTTCGTCTTCGTCATCCTTGGAAACAGTACTTGAAGATTGGAACACTTGCTCGAGAATGTGCTTACAAGATTGAGACTCTTAACAAATATCTCAACCCGGAAATCCAAGCATCTTCGGAATTCAAGTGTAAAGTTCAGGAGCCATGCGCGAAGATGTGTTCAGAATCTAACAAGGCGTTGAAGGCAATATCTTCATCAATCAAAACAATGACATGCCCATCATTTGCTAACAGCCACGTAGAAAAATCAAAAACTGCAGTTGAAGACCTCAAAATTGCACTAGAAATAGTTACGTTGGAAGATGTAGAACTCTTGGGCATAGTCCCAGTTGCCACAGTTGCAGCAATACTAGAAGAAATCACCAAGACCGTGGAGAAAATTTATGAATCAGTTTCCGAGCTTTCTCATTTAGCTGATTTCAAGAGTATTTTAGAACCCAATGTGTCACCAGAGAAGCCACCCCTACTTCATCGGGGTATCATAAAACCTGTTGTGGACATTGATAACACCGTCAATCATGTTGAAATTACGATCCAAGAGATAAATACAAACTCGCCAGAAAAGGGAAAAAAACACCCTCAAAATCCCCGAACAATTATCCCATCTTTGTTTGCTGATAGTAAAAGCAGTGCATCATGCATTTCGGCACAACCGCACAAGATACTGAATATGATACAGAATAGCAGAGGTAAGTATGGGCTAAATCAGACATTCCCCTATGATCAGAAACTGGAAGATTCCAGTACCTTAGCACAGGGTGAAGGTTATCTTGAAACCCAAGTGTTAGTAGTAGACTTGGTCAATGGGAATCACATGCTATGA 1671 0.4171 MDIESIMQANKAGFFAQWGNSLKALPRNSKAMVINFTRTIKKIGQDDPRRVIHSLKVAIALTLVSLFYYSRPLYDGFGVAGMWAVLTVVVVFEFTVGATLSKGLNRGCATLLAGALGVGGQHLATAFGERAEPIVLGILVFILAAGSTFFRFFPKIKARYDYGVVVFILTFCLITVSGYRVEQLFELAHQRLATILIGATACMVISIFICPVWAGEDLHKLVASNIEKLANYLEGFEAEYFHCSEDKQKPEKSVLEGYKNVLNSKASEESLANLARWEPGHGGFRLRHPWKQYLKIGTLARECAYKIETLNKYLNPEIQASSEFKCKVQEPCAKMCSESNKALKAISSSIKTMTCPSFANSHVEKSKTAVEDLKIALEIVTLEDVELLGIVPVATVAAILEEITKTVEKIYESVSELSHLADFKSILEPNVSPEKPPLLHRGIIKPVVDIDNTVNHVEITIQEINTNSPEKGKKHPQNPRTIIPSLFADSKSSASCISAQPHKILNMIQNSRGKYGLNQTFPYDQKLEDSSTLAQGEGYLETQVLVVDLVNGNHML* 557
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr4g0381 556 Pfam Aluminium activated malate transporter 42 418 IPR020966 GO:0015743
Apr4g0381 556 PANTHER ALUMINUM-ACTIVATED MALATE TRANSPORTER 10 1 441 - -
Apr4g0381 556 PANTHER ALUMINUM-ACTIVATED MALATE TRANSPORTER 8 1 441 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr4g0381 Apr-Chr4 3233699 3239800 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr4g0381 1 463 Miscellaneous Gene Families AT3G11680 56.356 2.45e-174 500
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr4g0381 - - aprc:113860951 1084.32
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr4g0381 4 3233699 3239800 Apr4g0381 4 3233699 3239800 ECH