Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr4g0380 ATGGCGACGCATCCTCAACCTTCAACCTCTTCGAACGCGTTTTCGTTTCTCTCAAAGGGTTGGCGTGAGGTTCGAGACTCGGCGGATGCGGATCTTCGCTTGATGCGTGACAGAGCCAATTCCTTCAAGAACCTAGCCACGTCGTTTGACCGCGAGCTCGAAAACTTCTTCAATTCCACTCCTCCGCCGTTCCCCGTCCCGGCCATGCGGTCTCCGCCGCCGGCCGAGATCGAATTCGTGAAGAAGCTGCAGCCGAAGCTGTCGGAGATTCGGCGGGCGTACTCGTCACCGGATTTCAGCAAGAAGGTTCTGGAGAAGTGGCGGCCACGGTCGCGAATTCGAATCGACCTTTCGGCTATAAAGAACGCGATCGTGTCGGAAGATAATGGGATTGTGGATTTCGAGAGGGGAAAGAGGGGCAAAGGGTTGAGCTTCTGGGAGGAGTGGAAAGGAGAGGGTGAAGCTAGGGATTGGGAACCAATTCGAGCTTTGAAGACCAGACTCAAACAGTTTGAGAAGCGCAGTTCCTCTTTTGATTTCAAGAACAGTGAATTCCTCGAGAAACTCAAGTCCAGCTTGCATAAATTTGACAAGTGCCTTTGGTGTGAGAATTTTCATGTTCATTTTTTGACTTTCTTGCAGAAATCAATGTGCAAGGAGCCTCAAGAGTCAAAGGATGTGCCACCATTGGATGTACCTGAACTTCTGGCCTACTTTGTAAAACAGTCTGGGCCATTTTTGGATCAACTTGGAGTCAAAAGAGACATATGTGACAAGATAGTAGAAAGCTTGTATAGCAAACGCAAAAACCATCTTTTACTGCATTCCCTCTCTGGGGAAGAATCTTCTGCCCTTGGGAATGGAAACATAAATGATGAGTTGGATTTGCGAATAGCAAGTGTCCTTCAGAGCACAGGGCACCGGTACGATGGTGGATTCTGGACAGACCATGCAAAGCATGACCCATCCGACAATGAAAGACATGTTGCAATAGTTACAACTGCCAGTCTTCCTTGGATGACAGGAACAGCTGTAAATCCACTATTTCGAGCTGCATATTTATCGCAATCTGCAAAGCGAAAAGTCACTCTACTGGTTCCATGGCTTTGTAAATCAGATCAAGAGCTAGTTTATCCCAGCAATCTCACTTTTACTACGCCGGAAGAGCAAGAAGTTTATATCCGGAGCTGGCTCGAGGAAAGGGTTGGTTTTAAGGCAGACTTCAAAATTTCTTTTTATCCTGGGAAGTTTTCAAAAGATAGACGGAGTATAATACCTGCTGGAGATACTTCTCAATTTATACCATCCAGGGATGCTGACATTGCTGTCCTGGAAGAACCGGAACATTTGAATTGGTATCATCATGGTAAGCGTTGGACAGACAAATTCAACCATGTTGTTGGTATTGTCCACACAAATTACTTAGAATACATCAAGAGGGAGAGAAATGGGGCACTCCAGGCATTCTTTGTGAAACACATAAACAACTGGGTTACAAGAGCATACTGCCACAAGGTTCTTCGTCTCTCAGCTGCTACTCAGGATTTACCCAAGTCTGTAATTTGCAATGTTCATGGTGTGAATCCCAAGTTCTTAAAAATTGGAGAAAAGATTGCTGCAGAGAGGGAGCAAGGGCAGCAAGCCTTTACAAAAGGGGCATATTTCTTGGGAAAGATGGTATGGGCAAAGGGATATAAGGAGTTGATAGATGTGTTAGCAAAGCATAAGACAGACCTTAATGGCTTCAAGTTGGATGTATTTGGAAATGGAGAGGATGCTAATGAAGTTCAGAGTGCAGCTAGAAGATTGGAATTGAATCTCAACTTTCAGAAAGGAAGAGATCATGCAGATGATTCTCTTCACGGGTACAAAGTCTTTATAAATCCTAGCATTAGTGATGTCCTATGCACAGCTACAGCTGAGGCACTTGCCATGGGCAAATTTGTAGTTTGTGCTGATCATCCATCAAATGAGTTCTTCAGGTCATTTCCCAACTGTTTGACTTACAAGACATCAGAAGACTTTGTGGCAAAAGTAAAAGAAGCATTAGAAAAAGAGCCTTATCCTTTAACACCTGAGCAAAGATATCAGCTTTCTTGGGAGGCTGCTACTCAAAGATTTATGGAATATTCCGAGCTTGACAGAATCCTGAACAAGGAAAAGGATGGTGAAAAATTGAGCACAGATAATGGAAAGCTCATTGCTAAGTCAGCTTCAATGCCTAATCTGGCAGAACTAGTAGATGGAGGCTTAGCATTTGCTCACTATTGTCTCACAGGGAACGAATTCCTTAGATTATGTACAGGAGCAATACCTGGGACTCGTGACTATGACAAGCAGCACTGTAAAGACCTTCATCTCTTGCCCCCACAGATTGAAAATCCTATCTATGGCTGGTGA 2400 0.4458 MATHPQPSTSSNAFSFLSKGWREVRDSADADLRLMRDRANSFKNLATSFDRELENFFNSTPPPFPVPAMRSPPPAEIEFVKKLQPKLSEIRRAYSSPDFSKKVLEKWRPRSRIRIDLSAIKNAIVSEDNGIVDFERGKRGKGLSFWEEWKGEGEARDWEPIRALKTRLKQFEKRSSSFDFKNSEFLEKLKSSLHKFDKCLWCENFHVHFLTFLQKSMCKEPQESKDVPPLDVPELLAYFVKQSGPFLDQLGVKRDICDKIVESLYSKRKNHLLLHSLSGEESSALGNGNINDELDLRIASVLQSTGHRYDGGFWTDHAKHDPSDNERHVAIVTTASLPWMTGTAVNPLFRAAYLSQSAKRKVTLLVPWLCKSDQELVYPSNLTFTTPEEQEVYIRSWLEERVGFKADFKISFYPGKFSKDRRSIIPAGDTSQFIPSRDADIAVLEEPEHLNWYHHGKRWTDKFNHVVGIVHTNYLEYIKRERNGALQAFFVKHINNWVTRAYCHKVLRLSAATQDLPKSVICNVHGVNPKFLKIGEKIAAEREQGQQAFTKGAYFLGKMVWAKGYKELIDVLAKHKTDLNGFKLDVFGNGEDANEVQSAARRLELNLNFQKGRDHADDSLHGYKVFINPSISDVLCTATAEALAMGKFVVCADHPSNEFFRSFPNCLTYKTSEDFVAKVKEALEKEPYPLTPEQRYQLSWEAATQRFMEYSELDRILNKEKDGEKLSTDNGKLIAKSASMPNLAELVDGGLAFAHYCLTGNEFLRLCTGAIPGTRDYDKQHCKDLHLLPPQIENPIYGW* 800
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr4g0380 799 PANTHER DIGALACTOSYLDIACYLGLYCEROL SYNTHASE 1, CHLOROPLASTIC 6 799 - -
Apr4g0380 799 PANTHER DIGALACTOSYLDIACYLGLYCEROL SYNTHASE 2, CHLOROPLASTIC 6 799 IPR044525 GO:0046481
Apr4g0380 799 Gene3D Glycogen Phosphorylase B; 551 705 - -
Apr4g0380 799 Pfam Glycosyl transferases group 1 554 687 IPR001296 GO:0016757
Apr4g0380 799 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 330 709 - -
Apr4g0380 799 CDD Glycosyltransferase_GTB-type 465 660 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr4g0380 Apr-Chr4 3226608 3232640 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr4g0380 12 621 Glycosyltransferase AT3G11670 67.727 0.0 833
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr4g0380 K09480 - gmx:100796354 1432.93
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr4g0380 4 3226608 3232640 Apr4g0380 4 3226608 3232640 ECH