Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr4g0355 ATGGCAATGAACTTGCACTTTACAATCATATGGTTTTCTTTATTTTATCTGCTGTGCTTCACACCAAGATTTCATTCTTCAAGGGTCCATCCAGTGCGTTCTTCCCAAAATGGGCTTTACACGACAAATTTCTTCACCCAAATACTCGATCACTTCAATTATAATCCCCAGAGCTACCAAACGTTTCAACACAGATATCTCATCAATGATACTTACTGGGGTGGTGCCAAGAAGAAAGCTCCAATCTTTGTCTACGCAGGAAATGAAGGGGACATAGAATGGTTCACACAGAACACGGGCTTCATGTTCGAAACAGCACCTTATTTCAAAGCCCTTTTAGTTTTTATAGAGCATAGATTCTATGGAAAATCTATACCATTTGGGGGGAACAAGGAGGTTGCAAATGCAAATAGCAGCACACTTGGATATATGAGTTCCACACAGGCATTGGCTGATTATGCCACTCTCATCATTGATCTGAAGAAGAATTTGTCAGCTACTGACTCTCCTGTTGTGGTGTTTGGAGGATCCTATGGAGGAATGCTTGCTGCATGGTTCAGGATGAAGTATCCGCATATTGCCATTGGAGCCTTGGCATCCTCTGCTCCAATCCTCCAATTTGTGGATTTGGTTTCACCATATACATACACTAACATCGTCACTCAAGACTATAAGAGCGAGAGTGAGAATTGTTACAAAGTGATTAAAGGGTCTTGGAAGCAAATAGAAGACATGGGCCGAAGACCTGGAGGACTAGAACAACTACGGAAATCGTTCAGAATATGCAACAATATAAGCACAGATGATCTTGAAGGTTGGCTTCGAGCGGCTTTAAGTTATGCGGCCATGACAGATTATCCAACACCTTCCAATTTCCTCATTCCCTTGCCTGCTTATCCAGTGAGAAAGATGTGTGAAGCAATTGATAACTTATCCACTGGAAACGAAACGTTCACCAAAATGTATGCAGCAGCTAACATCTTCTACAACTACAGTGGGACTGCGGCGTGTTTTGATTTGAATGGTAATTCGGATCCTCATGATCTCGGTGGATGGGGTTGGCAGGCATGTACGGAAATGATAATGCCCCTGGGTGGGAACAATGAGGACAGCATATTCCCAGCTTATAAATGGAACTTGAAAAACGTTCTCTCTTCCTGCAACCATGTCTATCACTTACAGCCAAGACCCCATTGGATTACCACTGAGTTTGGTGGCCATGACATTGAAAGAGTTCTGAAAAGGTCTGGAAGCAACATAATATTCTTTAACGGTTTAAGAGACCCTTGGAGCGGTGGAGGGGTGTTGAAGAATATATCAAAAACGATAGTTGCCATAGTAGCCAAAGAAGGAGCTCATCATGTAGACCTAAGGTTCTCAACCAAAGAAGATCCAGAGTGGTTAAAGGATGTAAGGAAACAAGAGATAAAGATGATAGCAAGATGGATCTCACAATATTATGAAGACATAAAAATGAAATAA 1482 0.4184 MAMNLHFTIIWFSLFYLLCFTPRFHSSRVHPVRSSQNGLYTTNFFTQILDHFNYNPQSYQTFQHRYLINDTYWGGAKKKAPIFVYAGNEGDIEWFTQNTGFMFETAPYFKALLVFIEHRFYGKSIPFGGNKEVANANSSTLGYMSSTQALADYATLIIDLKKNLSATDSPVVVFGGSYGGMLAAWFRMKYPHIAIGALASSAPILQFVDLVSPYTYTNIVTQDYKSESENCYKVIKGSWKQIEDMGRRPGGLEQLRKSFRICNNISTDDLEGWLRAALSYAAMTDYPTPSNFLIPLPAYPVRKMCEAIDNLSTGNETFTKMYAAANIFYNYSGTAACFDLNGNSDPHDLGGWGWQACTEMIMPLGGNNEDSIFPAYKWNLKNVLSSCNHVYHLQPRPHWITTEFGGHDIERVLKRSGSNIIFFNGLRDPWSGGGVLKNISKTIVAIVAKEGAHHVDLRFSTKEDPEWLKDVRKQEIKMIARWISQYYEDIKMK* 494
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr4g0355 493 Pfam Serine carboxypeptidase S28 47 473 IPR008758 GO:0006508|GO:0008236
Apr4g0355 493 PANTHER PROTEASE S28 PRO-X CARBOXYPEPTIDASE-RELATED 2 490 - -
Apr4g0355 493 Gene3D Serine carboxypeptidase S28, SKS domain 212 377 IPR042269 -
Apr4g0355 493 Gene3D alpha/beta hydrolase 44 483 IPR029058 -
Apr4g0355 493 PANTHER LYSOSOMAL PRO-X CARBOXYPEPTIDASE-LIKE PROTEIN 2 490 - -
Apr4g0355 493 SUPERFAMILY alpha/beta-Hydrolases 99 457 IPR029058 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr4g0355 Apr-Chr4 3025298 3028742 Dispersed/Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr4g0355 K01285 - gmx:100787376 826.239
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr4g0355 4 3025298 3028742 Apr4g0355 4 3025298 3028742 ECH