Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr4g0349 ATGTCTCAGACTAAGAAATTGACGCCGAATCTGGATCAGCAGGGCACGAAGGCGCTAAATCTCACAGTGCTCCAGCGAGTGGATCCATTCATCGACGAAATTCTCTTCACCGCCGCGCATGTTTCTTTCTACGACTTCAACATCGAAACCAACCAGTGGAGTCGCAAAGATGTTGAAGGATCTCTCTTCGTTGTCAAGAGGAATTCACAGCCACTGTTTCAGTTTATCGTTATGAATCGACGAAGTACAGCTAACCTAGTGGAGAATCTATTGGATTTTGAGTATGAAGTTAAAAATCCGTACTTATTATATCGTAATGCGGCCCAAGAAGTTAATGGTATATGGTTTTACAGTCCAGAAGAATGTGAAGAAGTTGCGAATCTCTTTAACAGGATACTGAATACGTACACAAAGGTTCCTCCAGGTACAATAATGCCTTCTAACAAAAGTGAATTTGAGGAACTTGAGCGTGTGTCAACTATACCGGGAAACCCTTTAGAGTCATCTTCAGCTGCTGTTTCTGCAACTGAAGCTGTTGAAGATCCTGTACTTACTAACTTCTTCAATACACTGAAGGTTACTGGAAATTATGCTTCCAATATAGAAAATTTTAGACAGCATTCTGCAACTGTCACCTGTACTGCTCCTAGTGGATTGTTGTCTCCTGCACCTACTGTGCAAGTACCATCTGCCTCTTGTTCAACTTCATCTGTATCAGGCTTACCCCATGACATTAATCTTGTTAAGCCTTCAACTTTTTTGGCATCCACATCTACGTCTTCACTATTGATTCCCCCTATTCCTTCATCTGTGCCACCTAGTGCAGTTGTTAATCATTCCCTAAATCTGCCACACCAATATGGGTCTCCTGTGCTTCAATCCTTCCTACCCCCTAATCCTCCTCTTTCTCTTACTCCTATTCCTAGCTCCTCTCCAAACCGACCTTTTATCAGCAGGGATAAAGTTCGTGATGCCCTTCTATCACTGGTTCAGGATGACCAATTCATTGACTTGATTTTTCAAACTTTACTGAAGGTTGGATGA 1044 0.4224 MSQTKKLTPNLDQQGTKALNLTVLQRVDPFIDEILFTAAHVSFYDFNIETNQWSRKDVEGSLFVVKRNSQPLFQFIVMNRRSTANLVENLLDFEYEVKNPYLLYRNAAQEVNGIWFYSPEECEEVANLFNRILNTYTKVPPGTIMPSNKSEFEELERVSTIPGNPLESSSAAVSATEAVEDPVLTNFFNTLKVTGNYASNIENFRQHSATVTCTAPSGLLSPAPTVQVPSASCSTSSVSGLPHDINLVKPSTFLASTSTSSLLIPPIPSSVPPSAVVNHSLNLPHQYGSPVLQSFLPPNPPLSLTPIPSSSPNRPFISRDKVRDALLSLVQDDQFIDLIFQTLLKVG* 348
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr4g0349 347 Gene3D - 7 136 IPR011993 -
Apr4g0349 347 SUPERFAMILY PH domain-like 19 136 - -
Apr4g0349 347 CDD Dcp1 16 133 - -
Apr4g0349 347 PANTHER TRANSCRIPTION FACTOR SMIF DECAPPING ENZYME DCP1 1 345 IPR010334 GO:0000290|GO:0008047|GO:0043085
Apr4g0349 347 Pfam Dcp1-like decapping family 17 130 IPR010334 GO:0000290|GO:0008047|GO:0043085
Apr4g0349 347 PANTHER MRNA-DECAPPING ENZYME-LIKE PROTEIN ISOFORM X1 1 345 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr4g0349 Apr-Chr4 2970813 2974797 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr4g0349 K12611 - gmx:100786833 492.271
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr4g0349 4 2970813 2974797 Apr4g0349 4 2970813 2974797 ECH