Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr4g0345 ATGGCGATGACAATACACGGTATCCTTGCTGGGCTAGCTTTTATGTTTTCAGCTAGCATTTTGCTACAAATTCTGGCATGTGCAATATACAACAACTGGTGGCCCATGTTATCAGCTCTGATGTATGTGCTGGTACCTATGCCTTGCTTATTCTTTGGAGGTGGATCCACTCAATTTCTGATGAGCCGTGATGGTGGGGGTTGGATAGATGCTGCAAAATTTTTGACGGGGGCTTCAGCCATTGGGAGCATAGCCATTCCCATAATCCTCAGGCACGCTCATATGATTGAGACAGGAGCGATGCTCATTGAGCTTGTATCGTTCTTCATATTTATATGTACTGTTATGTGTTTCCACCAAGCGAACCTTGATGATGATTGGTAA 384 0.4427 MAMTIHGILAGLAFMFSASILLQILACAIYNNWWPMLSALMYVLVPMPCLFFGGGSTQFLMSRDGGGWIDAAKFLTGASAIGSIAIPIILRHAHMIETGAMLIELVSFFIFICTVMCFHQANLDDDW* 128
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr4g0345 127 Pfam Vacuolar protein sorting 55 10 121 IPR007262 -
Apr4g0345 127 PANTHER LEPTIN RECEPTOR-RELATED 9 126 IPR007262 -
Apr4g0345 127 PANTHER RH04491P 9 126 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr4g0345 Apr-Chr4 2952993 2957346 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr4g0345 7 118 EF-hand Containing Proteins AT1G32410 54.464 4.44e-40 129
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr4g0345 - - gmx:100800586 246.899
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr4g0345 4 2952993 2957346 Apr4g0345 4 2952993 2957346 ECH