Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr4g0338 ATGAGCAGGTCAGGGCAACCACCGGATTTGAAGAAGTACATGGACAAGAAGCTTCAGATCAAGCTGAATGCAAATCGGATGATTGTTGGTACTCTCCGTGGCTTTGACCAGTTTATGAATTTAGTTGTTGACAACACTGTGGAAGTGAATGGCAATGAGAAAAATGATATAGGGATGGTGGTAATCAGAGGAAATAGTGTGGTCACTGTTGAGGCACTTGAACCCGTGAACAGGACCTGA 240 0.4417 MSRSGQPPDLKKYMDKKLQIKLNANRMIVGTLRGFDQFMNLVVDNTVEVNGNEKNDIGMVVIRGNSVVTVEALEPVNRT* 80
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr4g0338 79 PANTHER SMALL NUCLEAR RIBONUCLEOPROTEIN 1 79 IPR044641 -
Apr4g0338 79 PIRSF Lsm7 5 78 - -
Apr4g0338 79 Gene3D - 1 76 - -
Apr4g0338 79 SMART Sm3 8 72 IPR001163 -
Apr4g0338 79 CDD Sm_G 6 74 IPR034098 GO:0000387|GO:0005681
Apr4g0338 79 Pfam LSM domain 9 71 IPR001163 -
Apr4g0338 79 PANTHER SMALL NUCLEAR RIBONUCLEOPROTEIN G 1 79 - -
Apr4g0338 79 SUPERFAMILY Sm-like ribonucleoproteins 9 76 IPR010920 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr4g0338 Apr-Chr4 2894349 2895973 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr4g0338 K11099 - gmx:100305530 157.918
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr4g0338 4 2894349 2895973 Apr4g0338 4 2894349 2895973 ECH