Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr4g0337 ATGACGGAAGTGCTTCAGTTGCCTTCATCTTCAAGCTGTTCAACTCGTCCATGTGGTGGTCTCACACCCAATGATGGGTCGCACCCAAGTTCCCTTATTAACTCTCCCACAGTGGAAGAAGGGGATTTGGGTTTGGTCACAGAAACAGAGGAAGTTGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAGAAAGAAAGGGACAGAGAGAGAGATCAGATTTCTATTTTGACCCTTTTGATTGCTACTTTTAGGAAATCTTTGATTGGTTGTAGCACTAGTATTAGTAGCAGAAGTGGTGAGCTTTCTTCTCCTTCTTCCTCCATGGAGATTGGGTGGCCTTCCAATGTGAGACACGTGGCCCATGTTACCTTCGATCGATTCCATGGTTTTCTCGGTTTGCCTGTTGAATTCGAACCTGAAGTTCCAAGGAGACCTCCAAGCGCAAGTGCAAATGTTTTTGGGGTTTCAACAGAATCTATGCAACTTTCTTTTGATGCCAGAGGAAATAGTGTACCCACAATACTGCTGTTAATGCAAAGACATTTGTATGCACAAGGAGGCCTGCAGGCTGAAGGAATCTTCAGAATTAACGCTGAAAATAGTCAAGAGGAGTTTGTGAGGGAACAATTAAACAGAGGTGTAGTACCAAATGACATTGATGTGCACTGCTTGGCAGGTCTTATAAAGGCTTGGTTCAGAGAACTGCCAACTGGGGTATTGGACCCTCTTTCACCAGAGCAGGTGATGCAATCCCAGTCAGAAGAAGAATGTGCTGAGCTTGTCAGGCTTCTTCCTCCAACAGAAGCTGCTTTGCTAGATTGGGCAATAAACTTAATGGCGGATGTTGCTCAAATGGAACATCTGAACAAGATGAATGCACGTAATATTGCAATGGTTTTTGCGCCGAACATGACTCAAATGGCGGATCCTTTGACTGCTTTGATGTATGCGGTACAAGTCATGAATTTTCTCAAGACCCTTGTTGTGAAGACTCTGAAAGAAAGGGAGGAGTATATTGTAAAATCAAATCCTGTTCCAAACCTTAGCTCTTTTGATGACGATGGACACCAAAATGATTCACAAGTGCTTCACAAGGCTGACAGCGAAAATGGAAATGATTGTAGTGATGAGGATACAGTATTTCTCACTGCTGAACCTTCTCAACAAAGCCCTACGCGTCTTACTGAAGATGGCTGTGAAACTGAAACTGGATCCAAAAGTTTATCAACATTCACTGAAAATTTTATTTCTAGTGGAAATAGGTTGCTGGTTGATAGCTGCCCTTGCAATCTAGTGTCTCAAATTTGCTCTTTGGCAATTGGACTTCAAGACAGTGGCCTTACTACTGGACTGACAAAAGGGGATCAAGCAAAAATCTGCAGGAGCAAAAGTCTTCAATTGAGTGCTTCTGATTTAGACAAGTGTTCCAGAAAGGTGATTGAGCTTCCAGTAGCAGGAGCCGTGGAGAAGAACCTGGGAACTGCTATTATTGGACGTATAAATTCAAGAACAGAATTGGCTGAAGCATGGCGTTGA 1536 0.4303 MTEVLQLPSSSSCSTRPCGGLTPNDGSHPSSLINSPTVEEGDLGLVTETEEVEEEEEEEEEEEKERDRERDQISILTLLIATFRKSLIGCSTSISSRSGELSSPSSSMEIGWPSNVRHVAHVTFDRFHGFLGLPVEFEPEVPRRPPSASANVFGVSTESMQLSFDARGNSVPTILLLMQRHLYAQGGLQAEGIFRINAENSQEEFVREQLNRGVVPNDIDVHCLAGLIKAWFRELPTGVLDPLSPEQVMQSQSEEECAELVRLLPPTEAALLDWAINLMADVAQMEHLNKMNARNIAMVFAPNMTQMADPLTALMYAVQVMNFLKTLVVKTLKEREEYIVKSNPVPNLSSFDDDGHQNDSQVLHKADSENGNDCSDEDTVFLTAEPSQQSPTRLTEDGCETETGSKSLSTFTENFISSGNRLLVDSCPCNLVSQICSLAIGLQDSGLTTGLTKGDQAKICRSKSLQLSASDLDKCSRKVIELPVAGAVEKNLGTAIIGRINSRTELAEAWR* 512
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr4g0337 511 MobiDBLite consensus disorder prediction 44 65 - -
Apr4g0337 511 CDD CRIB 108 148 - -
Apr4g0337 511 PANTHER RHO GTPASE-ACTIVATING PROTEIN 1 1 511 - -
Apr4g0337 511 ProSiteProfiles Rho GTPase-activating proteins domain profile. 155 340 IPR000198 GO:0007165
Apr4g0337 511 PANTHER MKIAA1688 PROTEIN 1 511 IPR044785 GO:0005096
Apr4g0337 511 MobiDBLite consensus disorder prediction 1 37 - -
Apr4g0337 511 Pfam RhoGAP domain 172 306 IPR000198 GO:0007165
Apr4g0337 511 MobiDBLite consensus disorder prediction 1 70 - -
Apr4g0337 511 ProSiteProfiles CRIB domain profile. 110 123 IPR000095 -
Apr4g0337 511 MobiDBLite consensus disorder prediction 386 405 - -
Apr4g0337 511 SUPERFAMILY GTPase activation domain, GAP 150 328 IPR008936 GO:0007165
Apr4g0337 511 SMART RhoGAP_3 169 332 IPR000198 GO:0007165
Apr4g0337 511 Gene3D Rho GTPase activation protein 143 341 IPR008936 GO:0007165
Apr4g0337 511 Pfam P21-Rho-binding domain 109 135 IPR000095 -
Apr4g0337 511 SMART PBD_5 110 144 IPR000095 -
Apr4g0337 511 Gene3D CRIB domain 105 139 IPR036936 -
Apr4g0337 511 Coils Coil 45 72 - -
Apr4g0337 511 CDD RhoGAP 172 327 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr4g0337 Apr-Chr4 2886457 2890820 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr4g0337 - - gmx:100783118 823.928
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr4g0337 4 2886457 2890820 Apr4g0337 4 2886457 2890820 ECH