Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr4g0333 ATGTCGGGGAAAAGGAGGAGGAAGTTGAAATCGTTAAGTGATACAATCATAGACAATAGAAGAGCTGTTGCTGAGGTGAAAAGTGAAAATTTGGAGCTGCAATCCTGGGCCGATCTCCCTGCTGAACTCTTAGAATTGATCTTGTCCCATTTGGTCCTAGCAGATAACATCCGTGCTTCTGTTGTTTGCAAGAGATGGCATTCTGTTGCCAATGCTGTACGTGCAGTAAACCAATCGCCATGGCTTATGTATTTTCCAAAATTTGGGGACTGTTATGAATTCTATGACCCTGTGCAGCGTAAGACCTATTCCCTTGAGTTGCCTGAGTTGAATGGATCTAGAGTTTGTTATACGAAAGATGGTTGGCTATTGCTTTACCATCCCAGAGCTCACCGAGTATTCTTCTTTAATCCCTTTAGCAGGGAGCTGATCAAACTGCCAAGATTTGTGATAACGTACCAGATTGTTGCCTTCTCTTGTGCTCCAACATCACCTGACTGTGTTTTGTTTACTGTTAAGCATGTTAGTCCAACTATTGTAGCTATTAGCACATGTTATCCTGGGGCAACAGAATGGACCACTGTTAATTACCAAAACCGCTTGCCCTTTGTCAGTAGCATATGGAATAAGCTTGTGTTTTGTAATGGGTTATTTTATTGTCTGAGTCTCACAGGTTGGCTTGGGGTGTTTGACCCTGCAGGACGTACTTGGAGTGTTCTAGCAGTGCCTCCACCCAAATGCCCAGAGAACTTTTTCGCTAAAAACTGGTGGAAGGGGAAATTTATGACAGAGCATGAAGGAGATTTATTAGTAATTTATACTTGTTGTAGTGAAAACCCCATTATTTTCAAGTTAGATCAGACATTATTGAAATGGGTAGAGATGACGACACTTGATGGAGTAACTCTATTTGCTAGTTTTTTGTCATCTCATTCAAGGACTGACCTCATTGGAATAATGAGGAACAGTGTCTACTTCTCTAAAGTTCGTTTCTATGGAAAGCGATGCATATCATTCTCTCTTGATGACTATAGATACTATCCCCGTAAACAATGTCATGACTGGGGAGAACAAGACCCTTTTGAAAACATCTGGATTGAGCCACCAAAAGACTTTTCTGCGTGCATGTGA 1131 0.4147 MSGKRRRKLKSLSDTIIDNRRAVAEVKSENLELQSWADLPAELLELILSHLVLADNIRASVVCKRWHSVANAVRAVNQSPWLMYFPKFGDCYEFYDPVQRKTYSLELPELNGSRVCYTKDGWLLLYHPRAHRVFFFNPFSRELIKLPRFVITYQIVAFSCAPTSPDCVLFTVKHVSPTIVAISTCYPGATEWTTVNYQNRLPFVSSIWNKLVFCNGLFYCLSLTGWLGVFDPAGRTWSVLAVPPPKCPENFFAKNWWKGKFMTEHEGDLLVIYTCCSENPIIFKLDQTLLKWVEMTTLDGVTLFASFLSSHSRTDLIGIMRNSVYFSKVRFYGKRCISFSLDDYRYYPRKQCHDWGEQDPFENIWIEPPKDFSACM* 377
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr4g0333 376 PANTHER OS09G0392200 PROTEIN 5 372 IPR044619 -
Apr4g0333 376 SUPERFAMILY F-box domain 20 92 IPR036047 GO:0005515
Apr4g0333 376 PANTHER OS09G0392200 PROTEIN 5 372 - -
Apr4g0333 376 Pfam F-box-like 36 71 IPR001810 GO:0005515
Apr4g0333 376 Gene3D - 35 74 - -
Apr4g0333 376 ProSiteProfiles F-box domain profile. 33 84 IPR001810 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr4g0333 Apr-Chr4 2859217 2864122 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr4g0333 - - gmx:100796538 726.857
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr4g0333 4 2859217 2864122 Apr4g0333 4 2859217 2864122 ECH