Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr4g0328 ATGTTTCCTGTTAGCAAACCCTCTGTTTCTCTGCAATCGAGTATGGTTCCCTCGATTCCTGTGAAACCCAACATACACTCGTCAACTTTCTCTATCACCAACTCTGCGTCTTCCGGCGAGAGAATCACCACGCGCCGACGAACCATGTCACCATTCGAAACCCGAATCTCTCTCATTTTCGCCCTTGCTTCTCAAGCCACTTCTCTATCCCAGCGGCTTTTGGCGGATGTGACCACTGAGACTGCAAAATACGTGTTTCCGAAAAGATTTGAAAGCCGCACTCTCGAGGAGGCGTTGATGACTGTTCCGGACCTTGAGACTGTTAAATTCAAAGTTCTGAGTAGAAGGGAGCAGTATGAGATCAGGGAAGTTGAGCCTTACTTTGTAGCAGAGACAACAATGCCCGGGAAGAGTGGGTTTGATTTCAATGGTGCTTCTCGGTCCTTTAATGTCCTAGCTGAGTACCTTTTTGGTAAGAATACACCGAAGGAGAAAATGGAGATGACTACACCTGTTTTCACAAGTAAGAATCAATCTGATGGGATCAAAATGGATATGACAACTCCCGTGTTAACAACAAAGAATGAAGATCAAGATAAGTGGAAAATGTCTTTTGTCATGCCATCAAAGTATGGTGCTGACTTGCCACTACCCAACGATTCCTCTGTGAGGATTAAAGAGGTGCCCAGAAAAATAGTTGCTGTAGTTTCTTTTTCAGGTTTTGTGAATGATGAAGAAGTTAAGAAGCGTGAACTAAAACTGCAAGAAGCTTTAAAAAGTGACAGGCAGTTTAAAATTAAAGAGGGAACTTCAGTAGAAGTTGCACAGTATAATCCACCATTCACTCTTCCATTTCAACGCCGTAATGAGATTGCATTGGAGGTGGAATGGAAAGATAAGTAG 903 0.433 MFPVSKPSVSLQSSMVPSIPVKPNIHSSTFSITNSASSGERITTRRRTMSPFETRISLIFALASQATSLSQRLLADVTTETAKYVFPKRFESRTLEEALMTVPDLETVKFKVLSRREQYEIREVEPYFVAETTMPGKSGFDFNGASRSFNVLAEYLFGKNTPKEKMEMTTPVFTSKNQSDGIKMDMTTPVLTTKNEDQDKWKMSFVMPSKYGADLPLPNDSSVRIKEVPRKIVAVVSFSGFVNDEEVKKRELKLQEALKSDRQFKIKEGTSVEVAQYNPPFTLPFQRRNEIALEVEWKDK* 301
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr4g0328 300 Gene3D Regulatory factor, effector binding domain 104 178 IPR011256 -
Apr4g0328 300 Gene3D Regulatory factor, effector binding domain 179 300 IPR011256 -
Apr4g0328 300 Pfam SOUL heme-binding protein 176 293 IPR006917 -
Apr4g0328 300 Pfam SOUL heme-binding protein 105 174 IPR006917 -
Apr4g0328 300 PANTHER OS02G0533200 PROTEIN 19 299 - -
Apr4g0328 300 PANTHER HEME-BINDING PROTEIN-RELATED 19 299 IPR006917 -
Apr4g0328 300 SUPERFAMILY Probable bacterial effector-binding domain 100 176 IPR011256 -
Apr4g0328 300 SUPERFAMILY Probable bacterial effector-binding domain 176 295 IPR011256 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr4g0328 - - ccaj:109796809 516.924
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr4g0328 4 2814779 2818699 Apr4g0328 4 2814779 2818699 ECH