Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr4g0319 ATGGCAAGAATGCCTTTAGAGCCTCTAATTGTTGGAAGAGTCATAGGAGATGTTCTTGATTCGTTTACCACAAGCATAAAAATGAGTGTGAGCTACAACAACAGGCAAGTCTTCAATGGGCATGAGCTCTTCCCTTCAACTATCAACACCAAGCCCAAGGTTGAGATTGATGGTGCTGATATGAGGTCCTTCTTTACACTGGTCATGACAGACCCGGATGTTCCTGGCCCTAGTGATCCCTATCTGAGAGAACACTTGCACTGGATAGTGACAGATATTCCAGGCACAACAGATGCCACATTTGGCAAAGAGTTGGTGAGTTATGAGATCCCAAAGCCTAATATTGGGATCCATAGGTTTGTGTTTGTCTTGTTCAAGCAAAAACGTAGGCAGTGTGTTACTCCACCATCTTCAAGGGATCACTTCAACACTCGCAATTTTGCAGATGAAAATGACCTTGGCCTTCCTGTGGCTGCTGTCTACTTCAATGCTCAGAGGGAAAGGGGCTGCGGCGGCCGGGTTTCCTGCTGA 531 0.4633 MARMPLEPLIVGRVIGDVLDSFTTSIKMSVSYNNRQVFNGHELFPSTINTKPKVEIDGADMRSFFTLVMTDPDVPGPSDPYLREHLHWIVTDIPGTTDATFGKELVSYEIPKPNIGIHRFVFVLFKQKRRQCVTPPSSRDHFNTRNFADENDLGLPVAAVYFNAQRERGCGGRVSC* 177
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr4g0319 176 CDD PEBP_euk 27 164 IPR035810 -
Apr4g0319 176 ProSitePatterns Phosphatidylethanolamine-binding protein family signature. 65 87 IPR001858 -
Apr4g0319 176 Pfam Phosphatidylethanolamine-binding protein 49 162 IPR008914 -
Apr4g0319 176 Gene3D - 2 170 IPR036610 -
Apr4g0319 176 PANTHER PHOSPHATIDYLETHANOLAMINE-BINDING PROTEIN 3 168 IPR035810 -
Apr4g0319 176 PANTHER PROTEIN TERMINAL FLOWER 1 3 168 IPR031114 GO:0003712|GO:0009910
Apr4g0319 176 SUPERFAMILY PEBP-like 13 167 IPR036610 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr4g0319 Apr-Chr4 2749614 2759572 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr4g0319 K06910 - pvu:PHAVU_001G189200g 326.635
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr4g0319 4 2749614 2759572 Apr4g0319 4 2749614 2759572 ECH
Apr4g0319 4 2749614 2759572 Apr8g0615 8 5643763 5645351 PCT