Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr4g0316 ATGTATTCAATCTCATCCTATCTCTGTTCCGCAACCCCATTATACAACTCCTTCAGCAACCACAAATTGGAGCAATCAACAAGTGGAAGCCAAAACAAGAACACGATGGGAAAAGGTAGCAAGTCTCTTATTCAAATCCCAATCCTCCTACACACACTTTGCATCCTCTTGTTCCCACAACCGTTGCTATCTCAGGACAACAATTTCATTCGCCAACCCGCTGGTCAACTCATCATCACACCACAACAACGCTCCGATTCGGACCCCCAACAGGTGCACATTTCGTTGGTGGGCAAAGACAAGATGAGGGTGTCATGGATAACCGAAGATAAGAAGGGAGAATCAGTGGTGGAGTATGGAACAAAGGAAGGAGAATACAGTGAAAGAGCAATGGGGGAAAATGGCATGTACCAATATTTTTTCTATAGCTCAGGGAAGATCCACAGCGTTGTGATTGGGCCTTTGCCGCCCAATACCACTTACTTCTACAGGTGTAGTGGGTCGGGACCCGAGTATTCCTTGAAGACACCTCCTTCCAATTTGCCCATTGAATTTGTCATCGTTGGGGACTTGGGACAAACTGAATGGACAGCATCAACCTTGAAACATGTTGACAGCAGCGACTACGACGTGTTCTTGTTACCTGGAGATCTTTCCTATGCCGATTCCCAACAACCTTTGTGGGATTCCTTCGGTCGTTTGGTGGAACCATATGCTAGCAAAAGGCCATGGATGGTTACCGAAGGAAACCACGAGATTGAGATTTTCCCTATTATCTACCCGAAAGGGTTCGAAGCCTACAACACTCGCTGGCCCATGCCCTTCCAAGAAAGTGGTTCCACTTCAAACCTCTATTACTCCTTCGAGGTTGCTGGCACCCACGTCATCATGCTTGGTTCCTACACTGATTTTGATGCCCAATCAGAGCAATACACGTGGCTTCAATCTGACTTAGCCAACATTGATAGGGTGAAGAATCCTTGGGTGATTGCGCTGTTGCATGCACCTTGGTATAATACTAATGAGGCACACCAAGGTGAAGGTGAATCCATGAGACAAGCCATGGAGGAGTTACTTTATAATGCCCGCGTTGACTTGGTTTTTGCTGGCCATGTTCATGCATATGAACGCTTCACTCGAATTTACGACAACAAGGCTGATTCGTGCGGTCCGATGTATGTGACAATTGGGGACGGAGGAAACCGCGAGGGACTTGCGTTAAAGTTTAAGAACCCTCCAAATCCACTCTCATTGTTTCGCGAGCCAAGCTTTGGTCATGGAAGGTTGCGAATGGTAAATGAAACACATGCACGTTGGTCATGGTACCGCAACAATGACAGTGATGCAGTGGTAGCTGATAGCATTGTGATAGAGAGTTTAAGCAGCTCGAAAGGATGCTCCAATACACCAAACCAACAAGTTGTTACTCCTCACGAAGAGTTGTAA 1446 0.4654 MYSISSYLCSATPLYNSFSNHKLEQSTSGSQNKNTMGKGSKSLIQIPILLHTLCILLFPQPLLSQDNNFIRQPAGQLIITPQQRSDSDPQQVHISLVGKDKMRVSWITEDKKGESVVEYGTKEGEYSERAMGENGMYQYFFYSSGKIHSVVIGPLPPNTTYFYRCSGSGPEYSLKTPPSNLPIEFVIVGDLGQTEWTASTLKHVDSSDYDVFLLPGDLSYADSQQPLWDSFGRLVEPYASKRPWMVTEGNHEIEIFPIIYPKGFEAYNTRWPMPFQESGSTSNLYYSFEVAGTHVIMLGSYTDFDAQSEQYTWLQSDLANIDRVKNPWVIALLHAPWYNTNEAHQGEGESMRQAMEELLYNARVDLVFAGHVHAYERFTRIYDNKADSCGPMYVTIGDGGNREGLALKFKNPPNPLSLFREPSFGHGRLRMVNETHARWSWYRNNDSDAVVADSIVIESLSSSKGCSNTPNQQVVTPHEEL* 482
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr4g0316 481 Pfam Calcineurin-like phosphoesterase 185 375 IPR004843 GO:0016787
Apr4g0316 481 CDD MPP_PAPs 182 459 IPR041792 -
Apr4g0316 481 Gene3D - 88 179 - -
Apr4g0316 481 PANTHER ACID PHOSPHATASE RELATED 25 470 IPR039331 GO:0003993
Apr4g0316 481 PANTHER PURPLE ACID PHOSPHATASE 25 470 - -
Apr4g0316 481 Pfam Iron/zinc purple acid phosphatase-like protein C 390 454 IPR025733 -
Apr4g0316 481 MobiDBLite consensus disorder prediction 462 481 - -
Apr4g0316 481 SUPERFAMILY Metallo-dependent phosphatases 182 447 IPR029052 -
Apr4g0316 481 Gene3D - 180 465 IPR029052 -
Apr4g0316 481 Pfam Purple acid Phosphatase, N-terminal domain 89 175 IPR015914 GO:0003993|GO:0046872
Apr4g0316 481 SUPERFAMILY Purple acid phosphatase, N-terminal domain 80 178 IPR008963 GO:0003993|GO:0046872
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr4g0316 Apr-Chr4 2724447 2728284 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr4g0316 216 471 Miscellaneous Gene Families AT2G03450 31.879 1.96e-27 114
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr4g0316 K22390 - gmx:100817498 812.372
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr4g0316 4 2724447 2728284 Apr4g0316 4 2724447 2728284 ECH