Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr4g0301 ATGGCGTTGACAATCACAGAGAATGATCTTGTAAGAAGAACAAGAAATCACCGAAGCTGGCCGTCTACGAGTTTCAGATCGGCATGGACAGAATCTCCAACTTCAGATGTGTTCAACTTCCGGCGGGGTGAACACACACACGAGGATAATGAAGAAGATCTCAAATGGGCTGCCATTGAGCGCTTGCCCACATTTGATCGCATGAGAAAAGGGATGCTGAGGGTAATGCTTGATAATGGGAAGGTTGTGCATTGCCCAGTTGATGTCACCAATCTTGGGTTGCAAGATAAGAAGTTGTTACTTGAGAGTGTGCTAAAGTTTGTGGAAGATGATAATGAAAATTTCCTACGCAGACTCAGAGATAGGATTAATCGGGTGGGGATTGAAATTCCAAAAATTGAAATCCGATACGAGAACTTATCGGTGGAAGGAGATGTGTACGTTGGAAAAAGAGCACTCCCTTCTTTACTTAACGTTGCTCTCAACACTTTTGAGAGTATTATGGGATTGTTTCACCTTGTACCTTCCAAGAAGAGAAATATTCAAATTCTCAAAGATGTCAGTGGAATCGTAAGACCATCAAGGATGACCCTACTCTTAGGTCCTCCAGGTGCAGGAAAAACAACATTGCTTCTAACACTTGCAGGGAAGCTTGACCGGGACTTAAAGGCTTCTGGGAGAATCACTTACTGTGGCCATAAATTAAATGAATTTGTTGCTAGAAAAACTTGTGCCTATATTAGTCAGCATGATCTTCACAGTGGACAAATGACAGTGAGAGAGACATTAGATTTTTCAGGACGTTGTTTAGGTGTAGGCACAAGGTATGCAATGTTGGAAGAACTTTCAAGAAGGGAAAGAGAAGCAGGAATTAAGCCTCACCCTGAAATTGATGCATTCATGAAGGCTATAGCCATATCTGGCCAAAAAACTAGTTTGGCAACTGATTATGTTCTCAAGATACTTGGATTGGATATTTGCGCTGACATTATGGTTGGTGATAACATGGCAAGGGGTATATCTGGCGGACAAAAGAAACGTGTCACAACAGGGGAAATGCTTGTAGGACCGGCAAAGGCACTTTTTATGGATGAAATATCAACAGGATTAGATAGTTCCACCACTTTTCAAATATGCAAGTTCATGAAGCAAATGGTTCATATAATGGATGAAACCATGGTGATATCTCTTCTACAACCAGCACCAGAGACATTTGAACTATTTGATGACATTATCCTACTTTCAGAAGGTCAAATTGTGTACCAAGGTCCACGTGAGAATGTGCTTGAGTTCTTTGAAAACATGGGTTTCAAATGTCCTCCAAGAAAAGGAGTTGCTGACTTTTTACAAGAAGTAACCTCCAAGAAAGATCAAGAACAATATTGGTTTAGAAGAGATGAACCTTATAGATATATTGCAGCACTTGAATTTGCTGAGTCTTTCAATTCATTTCACATAGGAGAGAAACTTGCACAAGAGTTAAAGGTTCCATATGATAAGAGCAGAACCCACCGAGCTGCATTAGTGAAAGAAAAGTACGGTATATCAAACTGGGAACTATTGAAGGCATGCTTCGCAAGAGAATGGTTGCTTATGAAACGTGACATGTTTGTTTACATATTTAGGATGACACAGATTACGGTATTATCTATTTTAGTCTTCACTGTATTTCTTAGAACTGAAATGCCAGTGGGTACTGTACAAGATGGACAAAAATTCTTAGGGGCATTATTTTTTTCTCTAATGAATATGATGTTTAATGGGTCATCAGAACGAGCCATAATTGTTTCTAGGCTTCCTGTCTTTTACAAACAAAGGGACTTCATGTTCTTCCCTGCATGGGCATTTGGATTACCTGTATCAGTTCTTAAGATTCCTATATCCCTTGTGGAATCAGGGTTATGGATTGTCCTCACATACTATACCATTGGATTTGCTCCTTCAGCTTACAGATTTTTTCGACAATTCTTGGTATATTTTAGTGTTCATCAGATGTCTATGTCTCTATATCGGCTCATTGGTGCAGTTGGTAGAACGCAAGTTGTTGCTGGTATAGTGAATGGCTTAGTTTATCATCTAGTATTTGCTTTAGGAGGATTTATTGTCGATAGAAATGATATTAAGCCATGGATGATGTGGGGCTATTACATTTCTCCTATGATGTATGGTCAGAATGCCATTGTTATAAATGAATTTTTAGACGAAAGGTGGAGAAAACCAAATACAGACCCTAGAATAGATGCACCTACAGTTGGAAAAGTAATTCTCAAGTCTAGAGGCTTTTTCACAGAAGAGTATTGGTTTTGGATATGCATTGGAGCCTTGCTTGGCTTTGCTTTTCTTTTCAACCTTCTCTTTATTGCTGCATTGACTTATTTGAATCCTTTCAGTGATTCAAAGGCATTCATCGTGGATGAAGATGACAAGGAGAATGAAAGGTCAAACTCTAGACAGCATATCATTAGTAGAGTTCCAGGTAGAGACGTGGAAACGAAAAATTCATCAGAAATAGCTAGTTCTTCTCATCAAGAACAAAGAACAAGAATAGCCCTGCCATTTCAACCTCTTTCACTTGCATTCGATCATATGAACTACTATGTTGATATGCCAGCCGAAATGAAGAGCCAAGGAATCAATGAAGATAAACTTCAACTCCTACATGATGTTAGTGGTGCTTTTAGACCAGGCATATTGACAGCACTTATGGGTGTTAGTGGGGCTGGGAAGACAACCCTTATGGATGTTTTAGCTGGAAGAAAAACAGGTGGATACATTGAAGGAAGTATTACCATCTCTGGTTACCCAAAGAACCAAGCAACATTTGCTCGTGTTAGCGGTTACTGCGAACAGAATGACATTCATTCTCCATATGTTACTGTGTATGAATCACTATTATTTTCAGCATGGCTTCGACTTCCTTCAGATGTAAATACCCAAACACGAAAGATGTTTGTTGAGGAAGTTATGGAGTTGGTTGAGCTTAAATCGATTAAAGATGCTATAGTGGGTCTTCCAGGCATAAATGGTTTATCAACAGAACAAAGGAAAAGGCTTACTATTGCTGTAGAATTGGTTGCCAACCCTTCAATTATCTTCATGGATGAACCAACATCTGGGCTTGATGCTAGAGCTGCTGCTATTGTTATGAGAACTGTGAGAAATACTGTAGACACTGGGAGAACCGTTGTGTGCACAATTCACCAACCAAGCATAGACATTTTTGAAGCTTTTGATGAACTATTGTTGATGAAAAGAGGAGGACAAATTATCTATGCTGGATCTCTTGGTTATCATTCACATAAGCTCATAGAATATTTTGAGGTCATTGCAGGCGTTCCAAAGATCAAAGATGGCTATAATCCGGCAACATGGATGCTTGATATCAGCACTCCTTCAATGGAGGCGCAACTTGGCATAGATTTTGCAGAGATCTACACTGACTCTACACTTTACCAAAGGAATCAAGAGCTTATCAAAGAGCTCAGTACTCCACAACCAGGTTCCCAAGACCTATGCTTCCCAACTGAATATTCTCAATCATTCTTTGTGCAGTGGAAAGCTTGTTTTTGGAAACAATATTGGTCATATTGGAGAAATCCTGCCTATAATGGCGTTCGACTCCTCTTCACATTAGCCATTGGAATATTGTTTGGTCTAATCTTCTTGAATAAAGCCAAGAAAATCCAAACACAACAAGATTTATCAAATGTTTTGGGAGCCATGTTCGCTGCTGTGATGTTTCTTGGAAGCTTGAATGCAATGGGAGTGCAGCCAATTGTTGACATAGAAAGAACTATTTTGTATCGTGAAAGAGCTGCAGGGATGTATTCAGCAATTCCCTATGCACTTGGCCAGGTGGCAATAGAGGCAGTTTATAATTTAATTCAAACAGTCATTTACACTGTTGTCGTTTACTCTATGATTGGATTTGAATGGAAGGCTAGGAAATTGTTTTCATTCTATTACTTCAATGTGATGTGTTTTATCTGCTTCACGCTGTATGGGATGATGGTCGTTGCATTAACCCCAAGTTACCAAATTGCTACCATTTGTAGTACCTTCTTCTTGGGCTTATGGAATTTGTTCTCTGGCTTTGTCATTCCAAGAACGCAAATTCCTAAATGGTGGAGATGGTACTATTGGGCTTCTCCTAATGCTTGGACAATCTATGGGCTTGTTACCTCTCAACTTGGAGATGAAGTTGCACAAATAGAAATTCCAGGAGCTGAAAGCATGAGTCTGAAGGAACTCCTCAAGAAAGGCTTGGGTTTTGACTATGATTTCCTACCGGTGGTTGCTGTTGTCCATGTAGTGTGGGTTCTCATTTTCATGTTTGTTTATGCCTATGGCATTAAATTCCTCAACTTCCAAAAAAGATAG 4380 0.3952 MALTITENDLVRRTRNHRSWPSTSFRSAWTESPTSDVFNFRRGEHTHEDNEEDLKWAAIERLPTFDRMRKGMLRVMLDNGKVVHCPVDVTNLGLQDKKLLLESVLKFVEDDNENFLRRLRDRINRVGIEIPKIEIRYENLSVEGDVYVGKRALPSLLNVALNTFESIMGLFHLVPSKKRNIQILKDVSGIVRPSRMTLLLGPPGAGKTTLLLTLAGKLDRDLKASGRITYCGHKLNEFVARKTCAYISQHDLHSGQMTVRETLDFSGRCLGVGTRYAMLEELSRREREAGIKPHPEIDAFMKAIAISGQKTSLATDYVLKILGLDICADIMVGDNMARGISGGQKKRVTTGEMLVGPAKALFMDEISTGLDSSTTFQICKFMKQMVHIMDETMVISLLQPAPETFELFDDIILLSEGQIVYQGPRENVLEFFENMGFKCPPRKGVADFLQEVTSKKDQEQYWFRRDEPYRYIAALEFAESFNSFHIGEKLAQELKVPYDKSRTHRAALVKEKYGISNWELLKACFAREWLLMKRDMFVYIFRMTQITVLSILVFTVFLRTEMPVGTVQDGQKFLGALFFSLMNMMFNGSSERAIIVSRLPVFYKQRDFMFFPAWAFGLPVSVLKIPISLVESGLWIVLTYYTIGFAPSAYRFFRQFLVYFSVHQMSMSLYRLIGAVGRTQVVAGIVNGLVYHLVFALGGFIVDRNDIKPWMMWGYYISPMMYGQNAIVINEFLDERWRKPNTDPRIDAPTVGKVILKSRGFFTEEYWFWICIGALLGFAFLFNLLFIAALTYLNPFSDSKAFIVDEDDKENERSNSRQHIISRVPGRDVETKNSSEIASSSHQEQRTRIALPFQPLSLAFDHMNYYVDMPAEMKSQGINEDKLQLLHDVSGAFRPGILTALMGVSGAGKTTLMDVLAGRKTGGYIEGSITISGYPKNQATFARVSGYCEQNDIHSPYVTVYESLLFSAWLRLPSDVNTQTRKMFVEEVMELVELKSIKDAIVGLPGINGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLMKRGGQIIYAGSLGYHSHKLIEYFEVIAGVPKIKDGYNPATWMLDISTPSMEAQLGIDFAEIYTDSTLYQRNQELIKELSTPQPGSQDLCFPTEYSQSFFVQWKACFWKQYWSYWRNPAYNGVRLLFTLAIGILFGLIFLNKAKKIQTQQDLSNVLGAMFAAVMFLGSLNAMGVQPIVDIERTILYRERAAGMYSAIPYALGQVAIEAVYNLIQTVIYTVVVYSMIGFEWKARKLFSFYYFNVMCFICFTLYGMMVVALTPSYQIATICSTFFLGLWNLFSGFVIPRTQIPKWWRWYYWASPNAWTIYGLVTSQLGDEVAQIEIPGAESMSLKELLKKGLGFDYDFLPVVAVVHVVWVLIFMFVYAYGIKFLNFQKR* 1460
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr4g0301 1459 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 881 1095 IPR027417 -
Apr4g0301 1459 PANTHER ATP-BINDING CASSETTE TRANSPORTER 24 1459 - -
Apr4g0301 1459 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 179 440 IPR027417 -
Apr4g0301 1459 PANTHER ABC TRANSPORTER G FAMILY MEMBER 34-RELATED 24 1459 - -
Apr4g0301 1459 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 168 441 IPR003439 GO:0005524
Apr4g0301 1459 Pfam ABC-transporter N-terminal 109 159 IPR029481 -
Apr4g0301 1459 Gene3D - 872 1104 IPR027417 -
Apr4g0301 1459 Pfam Plant PDR ABC transporter associated 737 803 IPR013581 -
Apr4g0301 1459 Pfam ABC-2 type transporter 1184 1396 IPR013525 GO:0016020|GO:0140359
Apr4g0301 1459 Pfam ABC-2 type transporter 520 732 IPR013525 GO:0016020|GO:0140359
Apr4g0301 1459 Gene3D - 171 471 IPR027417 -
Apr4g0301 1459 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 858 1110 IPR003439 GO:0005524
Apr4g0301 1459 Pfam ABC-2 type transporter 1067 1129 IPR043926 GO:0140359
Apr4g0301 1459 Pfam ABC-2 type transporter 399 451 IPR043926 GO:0140359
Apr4g0301 1459 Pfam ABC transporter 886 1038 IPR003439 GO:0005524
Apr4g0301 1459 Pfam ABC transporter 184 366 IPR003439 GO:0005524
Apr4g0301 1459 CDD ABCG_PDR_domain2 855 1093 IPR034003 -
Apr4g0301 1459 SMART AAA_5 895 1087 IPR003593 -
Apr4g0301 1459 SMART AAA_5 193 425 IPR003593 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr4g0301 Apr-Chr4 2591336 2599639 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr4g0301 885 1075 Acyl Lipid Metabolism Gene Families AT1G54350 24.336 8.89e-06 48.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr4g0301 K08711 - gmx:100790545 2312.34