Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr4g0300 ATGGCCTCTTCAACAAAAAAGAAATTGGTCACAGGAAAAAGAAATAATAGGAGTTGGCCATCCGCGAGCTTTAGGGCAACATCTCCATCTATAGTAGACATGTTAAACATAACCCAAGAGGATAATGAACATGATCTTCAATGGGTTTCTATGCAACGCTTGCCAACATTTGATCGCATGAGAAAAGGGATTCTGAGACAATTGCTTGATGATGGAAAAATCATGCATCACCAAGTGGATGTCACCAATCTTGGGTTGCAAGACAAGAAGTTGCTACTAGAGAGTGTAATAGAGAATGACAATGAGAAATTCCTACTTAAATTTAGAGAAAGAGTTGACAGGGTGGGGATTGAAATTCCAAAAATTGAAGTTCGATATGAGAATTTATCAGTGGAAGCAGATGTGCATGTTGGAAGCCGAGCACTTCCTACCCTACTTAATGTTACTCTCAACACTTTTGAGAGGATTCAGGGGATTTTTCACTTCACACCTTTCAAGAAGAGAAAAATTCATATTCTCAAAGATCTCAGTGGAATTGTCAAACCATCGAGGATGACCCTACTTTTAGGTCCTCCAGGTGCAGGAAAAACAACACTGCTTCTGGCTCTTGCAGGAATGCTTGATAACAATTTAAGGGCTTCTGGAAGAATCACTTATTGTGGACATTCAATGAATGAATTTGTTGCCAAAAAAACTTGTGCATATATTGGTCAACATGACCTTCATTGTGGAGAATTGACAGTGAGAGAGACATTAGATTTTTCAGGACGTTATCTGGGTGTTGGCACAAGGTATGATATGTTAGAGGAAATCTTAAGAAGGGAGAAACAAGCTGGAATTAAGCCAGACCCTGAGATTGATGTATTCATGAAGGCTATAGCCATTTCGGGGCAAAAAACCAATTTGATAACAGATTATTTTCTCAAGGTACTTGGATTGGATATTTGTGCCGACATTAAGATTGGTGATAACATGAGAAGGGGGATCTCTGGAGGAGAAAAGAAACGTGTCACAACAGGGGAGATGCTAGTAGGACCAGCAAAGACACTTTTCATGGACGAAATATCAACAGGATTGGACAGTTCCACCACTTTTCAGATATGCAAGTTCATGAGGCAATTAGTTCATACAATGGATGAAACTGTGGTGATATCTCTTCTACAACCAGCACCAGAGACATTTGAACTATTTGATGACATTATCCTACTTTCAGAAGGTCAAATTGTGTACCAAGGTCCACGTGAGAATGTTCTTGAGTTCTTTGAAAAAATGGGTTTCAAATGTCCTCCAAGAAAAGGAGTTGCTGACTTTTTACAAGAAGTAACCTCTGAGAAAGATCAACAACAATATTGGTTTAGAAGAGATGAACCTTACAGATATATTTCAGTGCCTGAATTTGCTGAGTCTTTCTATGCATTTCACATAGGAGAGAAACTTGCACAAGAGTTGAAGGTTCCTTTTGATAAGAGCAGAACCCACCGAGCTGCCATAGTGAAAGAAAAGTGTGGTATATCAAATTGGGAACTACTGAAGGCATGTTTCTCAAGAGAATGGTTGTTTATGAAACGTGACACATTTGTTTACATATATAGGATAATACAGTTATCTGTCTTAGCTATTTTAGGCTTCACTTTGTTCCTTAGAACTGAAATGCCCAGTGACACTGTTCAAGATGGACAAAAGTTTTTTGGAGCATTATTTTTTGCTATGGTAAATATGATGTTTAATGGGGGGTCAGAACAAGGCATGATTGTTTCTAGGCTTCCTGTCTTTTACAAACAAAGGGATTCCATGTTCTATCCTGCATGGGCATTTGGGTTACCTATATGGCTTCTCAGGATTCCCGTCTCATTTGTGGAATCAGCAATATGGATTGCACTCACATACTATACAATTGGATTTGCTCCTTCAGCAGGCAGGCTTTTTCGACACTTCTTGGCATTATTTGGTATTCATCAGATGGCTATCTCTCTATACCGGCTCATTGGTGCAATTGGCAGAATACAAGTTGTTGCTAACATGCTGAGTGGCTTGATTTGCCAAATTATATTTGTGCTAGGAGGATTTATTGTCTCCAAAAATGATAGTAAGCCATGGATGATATGGGGCTATTACGTTTCTCCTATGATGTATGGTCAGAATGCCATAGTTATGAATGAATTTTTGGATGAAAGATGGAGTAAACCAAATACAGACCCTACAATTGATGCACCTACAATTGGACAAGCACTTCTCAAGTCTAGGGGCTTTTTCACTGAAGATTATTGGTTTTGGATATGCATTGGGGCGTTGTTTGCGTTCGCTCTTCTTTTCAACCTTCTCTTCATTGTGGCTCTGACTTATTTGAATCCATTTGGTGATTCAAAAGCATTCATCATAGATGAAAGTTACAAGAAGAATGAAAAGTCAACCCGTGAACACCATGTCGAAGGAGTTCCATGTATGGACATGACAAAGAAAAATTCTTCAGAAATTGCTGGTTCTTTTAATCAAGAACGAAGAACAAGAATGGCCCTGTCATTTCAACCTCTTGCACTTTCATTCAATCATGTGAACTATTATGTAGATATGCCTGCTGAAATGAAAAATCAAGAAATGAACGAAGATAGGCTTCAACTGCTACATGATGTAAGTGGTGCTTTTAGACCAGGCGTATTGACAGCACTTATGGGTGTTAGTGGTGCTGGGAAGACAACCCTTATGGATGTATTAGTTGGAAGAAAAACAGGAGGGTACATTCAAGGAACTATTAACATTTCAGGTTACCCAAAGAACCAAGCAACATTTGCTCGTGTTAGCGGTTACTGCGAACAGAATGATATTCATTCACCCTATGTTACTGTATATGAATCACTATTATTTTCAGCGTGGCTTCGCCTTCCTTCAGATGTAAATGCACAAACGCGAAAGATGTTTGTTGAAGAAGTTATGGAATGGGTTGAGCTTAAACCAATCAAAGATGCACTTGTGGGCCTTCCAGGAGTGGATGGTTTATCAACAGAACAAAGGAAAAGGCTTACTATTGCTGTAGAATTGGTTGCCAACCCTTCAATTATCTTCATGGATGAACCAACATCTGGGCTTGATGCTAGAGCTGCTGCTATTGTCATGCGAACTGTGAGAAACACTGTAGACACTGGGAGAACCGTTGTGTGCACAATTCACCAACCAAGCGTAGACATTTTCGAAGCTTTTGATGAGCTATTGTTGTTGAAAAGAGGAGGACAAGTTATCTTTGCTGGACCTCTTGGTCACAACTCACATAAGCTCATAGACTATTTTGAAGCTATTGCAGGGGTTCCGAAAATCAAGGATGGTTATAATCCTGCCACATGGATGCTTGAGATCAGCACTCCTTCAATTGAGGCTCAACTTGGCAAAGATTTTGCGGATATTTATGCTAACTCCACACTTTACCAAACGAATCAAGAGTTTATTAAAGAGCTCAGTACTCCAGCATCAGGTTCCAAGGACTTATTCTTCCCAACCAAATATTCCCAATCATTCTTGGTGCAATGGAAAGCTTGTGCTTGGAAACAATATTGGTCATATTGGAGAAATCCTCCGTACAATGCTGTGCGATTCTTCCTCACATTAGTCTTTGCTGTGATGTTTGGTGTAATTTTCTTGAATAAAGCGAAAAATGTCCAAAAAGAACAAGATTTATTTGATCTTTTGGGAGCCATGTACTCTACCGTGATGTTCCTTGGAACCATGAACGCTGTGGGAGTGCAGCCAGTTGTGGATATAGAAAGAACGGTATTGTATCGTGAAAGAGCCGCAGGAATGTATTCAACATTGCCCTACGCGCTTGGTCAGGTCGTTATAGAGACAATGTACAGCTCAATTCAAACGGTCGTTTATACTATGGTCATTCATTCCATGATGGGATTTAAATGGACGGCAGGAAAATTCTTTTCGTTCTACTATTACATGCTAATGTGTTTCATTTACTTCACCATGTATGGGATGATGATTGTTGCCCTAACCCCAAGTTACCAAATTGCTTGCATTTGTATTTCCTTCTTCTTGTGCATCTGGAACTTGTTCTCCGGCTTTTTCATTCCTAGGATGCAAATTCCTGTGTGGTGGAGATGGTACTATTGGGCTACTCCTAATGCTTGGACGATCTATGGCCTTGTTACCTCTCAATTGGGTGATGAAATTGCACAAATAGATGTCGCAGGAGCTAAGAGTATGGGGCTGAAGGAATTCCTTAAGGAAAACTTGGGTTATGAATATGATTTCTTGCCAGTGGTTGCTGTTGTTCATGTAGGCTGGGTTATCATTTTCTTATTTGTGTTTGCCTATGCCATAAAATTCCTGAACTTCCAAAAGAGATAA 4344 0.3964 MASSTKKKLVTGKRNNRSWPSASFRATSPSIVDMLNITQEDNEHDLQWVSMQRLPTFDRMRKGILRQLLDDGKIMHHQVDVTNLGLQDKKLLLESVIENDNEKFLLKFRERVDRVGIEIPKIEVRYENLSVEADVHVGSRALPTLLNVTLNTFERIQGIFHFTPFKKRKIHILKDLSGIVKPSRMTLLLGPPGAGKTTLLLALAGMLDNNLRASGRITYCGHSMNEFVAKKTCAYIGQHDLHCGELTVRETLDFSGRYLGVGTRYDMLEEILRREKQAGIKPDPEIDVFMKAIAISGQKTNLITDYFLKVLGLDICADIKIGDNMRRGISGGEKKRVTTGEMLVGPAKTLFMDEISTGLDSSTTFQICKFMRQLVHTMDETVVISLLQPAPETFELFDDIILLSEGQIVYQGPRENVLEFFEKMGFKCPPRKGVADFLQEVTSEKDQQQYWFRRDEPYRYISVPEFAESFYAFHIGEKLAQELKVPFDKSRTHRAAIVKEKCGISNWELLKACFSREWLFMKRDTFVYIYRIIQLSVLAILGFTLFLRTEMPSDTVQDGQKFFGALFFAMVNMMFNGGSEQGMIVSRLPVFYKQRDSMFYPAWAFGLPIWLLRIPVSFVESAIWIALTYYTIGFAPSAGRLFRHFLALFGIHQMAISLYRLIGAIGRIQVVANMLSGLICQIIFVLGGFIVSKNDSKPWMIWGYYVSPMMYGQNAIVMNEFLDERWSKPNTDPTIDAPTIGQALLKSRGFFTEDYWFWICIGALFAFALLFNLLFIVALTYLNPFGDSKAFIIDESYKKNEKSTREHHVEGVPCMDMTKKNSSEIAGSFNQERRTRMALSFQPLALSFNHVNYYVDMPAEMKNQEMNEDRLQLLHDVSGAFRPGVLTALMGVSGAGKTTLMDVLVGRKTGGYIQGTINISGYPKNQATFARVSGYCEQNDIHSPYVTVYESLLFSAWLRLPSDVNAQTRKMFVEEVMEWVELKPIKDALVGLPGVDGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSVDIFEAFDELLLLKRGGQVIFAGPLGHNSHKLIDYFEAIAGVPKIKDGYNPATWMLEISTPSIEAQLGKDFADIYANSTLYQTNQEFIKELSTPASGSKDLFFPTKYSQSFLVQWKACAWKQYWSYWRNPPYNAVRFFLTLVFAVMFGVIFLNKAKNVQKEQDLFDLLGAMYSTVMFLGTMNAVGVQPVVDIERTVLYRERAAGMYSTLPYALGQVVIETMYSSIQTVVYTMVIHSMMGFKWTAGKFFSFYYYMLMCFIYFTMYGMMIVALTPSYQIACICISFFLCIWNLFSGFFIPRMQIPVWWRWYYWATPNAWTIYGLVTSQLGDEIAQIDVAGAKSMGLKEFLKENLGYEYDFLPVVAVVHVGWVIIFLFVFAYAIKFLNFQKR* 1448
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr4g0300 1447 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 862 1082 IPR027417 -
Apr4g0300 1447 Pfam ABC-2 type transporter 388 439 IPR043926 GO:0140359
Apr4g0300 1447 PANTHER ABC TRANSPORTER G FAMILY MEMBER 34-RELATED 27 1447 - -
Apr4g0300 1447 MobiDBLite consensus disorder prediction 1 23 - -
Apr4g0300 1447 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 846 1098 IPR003439 GO:0005524
Apr4g0300 1447 SMART AAA_5 883 1075 IPR003593 -
Apr4g0300 1447 SMART AAA_5 182 414 IPR003593 -
Apr4g0300 1447 Pfam ABC-transporter N-terminal 98 148 IPR029481 -
Apr4g0300 1447 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 168 429 IPR027417 -
Apr4g0300 1447 Pfam ABC-2 type transporter 509 721 IPR013525 GO:0016020|GO:0140359
Apr4g0300 1447 Pfam ABC-2 type transporter 1172 1384 IPR013525 GO:0016020|GO:0140359
Apr4g0300 1447 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 154 430 IPR003439 GO:0005524
Apr4g0300 1447 Pfam Plant PDR ABC transporter associated 726 792 IPR013581 -
Apr4g0300 1447 Gene3D - 859 1091 IPR027417 -
Apr4g0300 1447 CDD ABCG_PDR_domain2 843 1081 IPR034003 -
Apr4g0300 1447 Gene3D - 159 460 IPR027417 -
Apr4g0300 1447 PANTHER ATP-BINDING CASSETTE TRANSPORTER 27 1447 - -
Apr4g0300 1447 Pfam ABC transporter 173 355 IPR003439 GO:0005524
Apr4g0300 1447 Pfam ABC transporter 874 1026 IPR003439 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr4g0300 Apr-Chr4 2579052 2587964 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr4g0300 K08711 - gmx:100791069 2379.75