Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr4g0298 ATGGTTTACACCATCTCTGGAATTCGATTTCCTGTTGTTCCCTCGCTGTACAAGTCCAGCTTCCGTTGTGATCGCAGGACTGCATCGCTTCCTCTTTTCCTCCGGAACAACTCTTCCTCCCGGAAAACCCTTGCTGTAAAATTTTCCCATGATTCTGATTCCACTTCTTCCATGATTGCTGAATCTGATAAGGTACTTATTCCTCAGGATCAAGATAACTCTGCATCCTTGACAGAGCAACTTGAAACTCCTGATATAACCTCAGAGGATGAACAGAACTTAGAGGAATTAACCATGGAAGATGAGGATAAATACAGCTTTGAAGAGATTGAGGACGGCCAAGGTTCTGTTGTTTCATCACTTGCAGATGTTAACACCAATGCTCAAGCCAAGAAGACATCAGTATCTGTTCACAGGAAAGTGAAAATAAAAACTGATAAAGCTAAACCTAAGATCATTCCCCCACCTGGCACTGGGCAGAGAATATACGAGATTGATCCATCTTTGCTAAATCACCGTGAGCATCTTGATTTCCGTTTTGGACAATACAAAAGATTGCGTTACGAAATTGACAAGCATGAAGGTGGTCTGGATGCATTTTCTCGAGGTTATGAAAATTTTGGCTTCACGCGCAGTACCACCGGCATTACCTACAGAGAGTGGGCACCTGGAGCGAAGTCAGCAGCATTAATTGGAGACTTCAACAATTGGAATCCAAATGCAGATGTTATGACCCGGAATGAATTTGGTGTGTGGGAGATCTTCTTGCCAAACAATGTGGATGGTTCACCACCAATTCCTCATGGTTCTCGGGTCAAGATTCGCATGGACACTCTCTCTGGAATCAAGGACTCAATTCCTGCTTGGATCAAGTTCGCTGTACAGGCTCCTGGTGAAATTCCATACAACGGAATATACTATGACCCACCCGAAGAGGAGAAATATGTCTTTGAACATCCTCAGCCGAAGAGACCAAAATCACTTAGAATATACGAATCACACATTGGAATGAGTAGTCCAGAGCCAAAAATCAACACATATGTCAATTTTAGAGATGATGTACTACCTCGTATTAAAAGGCTTGGCTATAATGCTGTCCAGATTATGGCTATCCAAGAACATTCTTATTATGCCAGCTTTGGGTACCATGTTACAAATTTCTTTGCACCTAGCAGCCGGTTTGGAACTCCAGAGGAACTTAAGTCTCTGATAGACAGAGCCCATGAACTAGGTCTGCTTGTTCTGATGGATATTGTACACAGCCATGCATCAAATAATACACTGGATGGCCTGAACATGTTTGATGGAACTGATGGTCATTACTTCCATCCTGGGTCACGAGGTTATCATTGGATGTGGGATTCTCGCCTTTTTAACTATGGAAGCTGGGAAGTACTGAGGTATCTACTTTCAAATGCAAGATGGTGGCTGGATGAATACAAGTTTGATGGATTTCGATTTGATGGCGTTACATCAATGATGTACACACATCATGGATTGCAGGTCGGATTTACTGGAAATTACAACGAGTATTTTGGTTATGCAACTGATGTTGACGCTGTGGTTTACCTGATGCTGGCTAATGATGTCATTCGTGGGCTCTTCCCCGAGGCTGTTATAATTGGTGAAGATGTTAGTGGAATGCCAACATTCTGCCTTCCTACCCAAGATGGTGGGGTTGGCTTTGATTATCGCCTGCATATGGCTGTTGCTGACAAGTGGATTGAGATTCTCAAGAAAAAAGATGAAGACTGGAAAATGGGTGATATAGTCCACACACTTACAAACAGAAGGTGGCTGGAAAAATGCGTGGCTTATGCTGAAAGTCATGACCAGGCCTTGGTTGGTGACAAGACAATTGCATTTTGGTTGATGGACAAGGATATGTATGATTTCATGGCTTTAGACAGACCATCTACTCCTCGTATAGATCGTGGTATAGCATTACACAAAATGATTAGGCTTATTACCATGGGCCTTGGTGGTGAAGGGTATTTGAATTTCATGGGGAATGAATTTGGCCATCCTGAGTGGATTGATTTTCCAAGGGGTGATCAACATCTTCCTAATGGTGCAGTAATTCCTGGGAATAACAACAGTTTTGATAAATGTAGGCGTAGATTTGACTTGGGTGATGCAGAGTATCTAAGATATCGAGGGATGCAAGAGTTTGATCAAGCCATGCAGCATCTAGAAGAAAAGTTTGGTTTCATGACTTCTGAGCACCAATATATTTCACGGAAAAATGAAGGTGATAGAGTTATAGTCTTTGAAAGGGGAAACCTAGTCTTTGTCTTCAATTTTCATTGGACCAACAGCTATTCAGATTACAGAATTGGCTGCTCATCCCCGGGGAAATATAAGATTGTCTTGGATTCAGATGATGCCTTGTTTGGTGGCTTCAGTAGGCTCAACCACGCTTCTGAGTACTTCACCACTGTACGGGACTTCCTTGTACTTGTGTCTGCGTGTGCACACACTCTAGAATGGACACAAGCGTGTCATTGTGTCTTGAAGGATGGTACGATGACCGACCTCGATCCTTTCTTATCTATGCCCCTTGCAGAACAGCAGCGGTTTATGCCCTTGCAGATGAAGCAGAGGAAGAAGAGCCAGTTGAACCCTGATGACATGTTTCTGAGATAA 2646 0.4293 MVYTISGIRFPVVPSLYKSSFRCDRRTASLPLFLRNNSSSRKTLAVKFSHDSDSTSSMIAESDKVLIPQDQDNSASLTEQLETPDITSEDEQNLEELTMEDEDKYSFEEIEDGQGSVVSSLADVNTNAQAKKTSVSVHRKVKIKTDKAKPKIIPPPGTGQRIYEIDPSLLNHREHLDFRFGQYKRLRYEIDKHEGGLDAFSRGYENFGFTRSTTGITYREWAPGAKSAALIGDFNNWNPNADVMTRNEFGVWEIFLPNNVDGSPPIPHGSRVKIRMDTLSGIKDSIPAWIKFAVQAPGEIPYNGIYYDPPEEEKYVFEHPQPKRPKSLRIYESHIGMSSPEPKINTYVNFRDDVLPRIKRLGYNAVQIMAIQEHSYYASFGYHVTNFFAPSSRFGTPEELKSLIDRAHELGLLVLMDIVHSHASNNTLDGLNMFDGTDGHYFHPGSRGYHWMWDSRLFNYGSWEVLRYLLSNARWWLDEYKFDGFRFDGVTSMMYTHHGLQVGFTGNYNEYFGYATDVDAVVYLMLANDVIRGLFPEAVIIGEDVSGMPTFCLPTQDGGVGFDYRLHMAVADKWIEILKKKDEDWKMGDIVHTLTNRRWLEKCVAYAESHDQALVGDKTIAFWLMDKDMYDFMALDRPSTPRIDRGIALHKMIRLITMGLGGEGYLNFMGNEFGHPEWIDFPRGDQHLPNGAVIPGNNNSFDKCRRRFDLGDAEYLRYRGMQEFDQAMQHLEEKFGFMTSEHQYISRKNEGDRVIVFERGNLVFVFNFHWTNSYSDYRIGCSSPGKYKIVLDSDDALFGGFSRLNHASEYFTTVRDFLVLVSACAHTLEWTQACHCVLKDGTMTDLDPFLSMPLAEQQRFMPLQMKQRKKSQLNPDDMFLR* 882
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr4g0298 881 SUPERFAMILY Glycosyl hydrolase domain 740 812 - -
Apr4g0298 881 Pfam Alpha amylase, C-terminal all-beta domain 744 813 IPR006048 GO:0003824|GO:0005975|GO:0043169
Apr4g0298 881 PANTHER 1,4-ALPHA-GLUCAN-BRANCHING ENZYME 17 813 IPR037439 GO:0003844|GO:0005978
Apr4g0298 881 CDD AmyAc_bac_euk_BE 311 726 - -
Apr4g0298 881 Gene3D - 740 833 IPR013780 -
Apr4g0298 881 MobiDBLite consensus disorder prediction 67 83 - -
Apr4g0298 881 Gene3D Glycosidases 166 735 - -
Apr4g0298 881 Pfam Alpha amylase, catalytic domain 355 426 IPR006047 GO:0005975
Apr4g0298 881 SUPERFAMILY E set domains 200 309 IPR014756 -
Apr4g0298 881 Gene3D Immunoglobulins 202 314 IPR013783 -
Apr4g0298 881 PANTHER 1,4-ALPHA-GLUCAN-BRANCHING ENZYME 2-1, CHLOROPLASTIC/AMYLOPLASTIC 17 813 - -
Apr4g0298 881 SUPERFAMILY (Trans)glycosidases 319 733 IPR017853 -
Apr4g0298 881 SMART aamy 345 705 IPR006047 GO:0005975
Apr4g0298 881 CDD E_set_GBE_euk_N 213 307 - -
Apr4g0298 881 Pfam Carbohydrate-binding module 48 (Isoamylase N-terminal domain) 207 289 IPR004193 GO:0004553|GO:0005975
Apr4g0298 881 MobiDBLite consensus disorder prediction 67 89 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr4g0298 Apr-Chr4 2529660 2560654 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr4g0298 1 813 Glycoside Hydrolase AT2G36390 75.122 0.0 1276
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr4g0298 K00700 - gmx:100785968 1565.82
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr4g0298 4 2529660 2560654 Apr4g0298 4 2529660 2560654 ECH