Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr4g0290 ATGAGAGGTATAGCATCTTGTTACAACGAACATGCCATTAGAGTGTCTGATTCATATTGTTCAAGGCCTTCAAACCAGGCTTTTCTCTGTCCAAAGTTGAACCATTCTTCCAGAGATTCAGTCACATGCATGTACAAAGTCAACTTGATCTCAACGCTACAACGAGTACTCTTCATCACACTAACATGGACCAAGAAACTCATGGGTCAAGGCTTCACCATAACCATCACAAATTCCGGACATTCCCCTTCTAAATTCAATGCAAGGCAATTGATGAGAAAGATCAAAGGCAACCAAACGTTCAAATCCCACAACTTTGAAATCCAAGTCCTGTGGGATCTCTCTGATGCGAGATACGAGGAAGGCCCAGAACCAGTTGGTGGGTTTTACGTCGTCGTTTTGGTGGATTCTGAATTAGGCCTGCGCCTCGGTGATAGAACCGAAAGTGAAGATCAATCGTTGAACTTGGACGTGAAGGAAGCGAAATTCTCAATGGTTTCAAGGAGTGAGAGATTTTCTGGCACTGCTGTTTATGCAACGAAGGCAAAATTTTCTGAGAATGGGATTGCACATGACATAGTGATAAAGTGTGGTGCGGAAGAAGAAGGGTCAAAGAGTCATGTTTTGTCTGTGTGTGTGGACAAGAAAACGATGTTCCAGGTTAAGAGGTTGCGGTGGAATTTTCGTGGGAACCAAACAATTTTTGTTGATGGTTTGGTTGTGGATATGATGTGGGACGTTCATGATTGGCTTTTCAATCCAAATTCTGCTTCTGCAGTGTTCATGTTCAGAACAAGGAGTGGCTTAGATAGTAGGCTATGGTTGGAGGAGAAAACTTTGCAGAATCACAAGGAACAGGACAGAATTGGGTTCTCTTTGTTGATATGTGCCTGTAAGAATTCTGACTAA 909 0.4268 MRGIASCYNEHAIRVSDSYCSRPSNQAFLCPKLNHSSRDSVTCMYKVNLISTLQRVLFITLTWTKKLMGQGFTITITNSGHSPSKFNARQLMRKIKGNQTFKSHNFEIQVLWDLSDARYEEGPEPVGGFYVVVLVDSELGLRLGDRTESEDQSLNLDVKEAKFSMVSRSERFSGTAVYATKAKFSENGIAHDIVIKCGAEEEGSKSHVLSVCVDKKTMFQVKRLRWNFRGNQTIFVDGLVVDMMWDVHDWLFNPNSASAVFMFRTRSGLDSRLWLEEKTLQNHKEQDRIGFSLLICACKNSD* 303
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr4g0290 302 Pfam Plant protein of unknown function (DUF868) 38 299 IPR008586 -
Apr4g0290 302 PANTHER EXPRESSED PROTEIN 1 300 IPR008586 -
Apr4g0290 302 PANTHER FAMILY PROTEIN, PUTATIVE (DUF868)-RELATED 1 300 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr4g0290 Apr-Chr4 2428956 2429864 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr4g0290 1 300 EF-hand Containing Proteins AT5G28150 36.304 3.19e-58 187
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr4g0290 - - pvu:PHAVU_001G186900g 494.197
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr4g0290 4 2428956 2429864 Apr4g0290 4 2428956 2429864 ECH