Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr4g0289 ATGTTGAACATGTTCGCAGTCCTCGCTCTGTCCCTAGCATCTACGTTGACATGCTTTGCGATTGCAACCACTTCCATTCCACAAGAGCTTCACATAGGCTTCTCGGCAACTCCACAATCTTCAACGTCGTCGTTTCAACCAGTTCTTAGCGACCCCAGCGGAAACTTCTCTCTGGGGTTCCTCCGCACGAACCTGAACCAGCTGGCACTAACTGTCATCCACGTGGCATCCTCAGAGCCATTCTGGACGGCCAACTTAACTCACGTGGCATCCTGGTCCGACACCACGCGCCTCTTCTTCAACGGGAGTCTCGTTTTGTCGGACCCCAAAACGCGTGTTTCGTGGTCAACCGCCACAAACGGTGACAGCGTGGTGCTCCTGGACACCTCCAACTTGCAGGTCCACGACAAAGGCACTCCCATCTGGGAAAGTTTTCATTTTCCCACAAATACCCTCGTTCAGAGCCAGAACTTCACCGCTAAAATGTCTTTGGTGTCTCCCAACCGTTTCTACTCTTTACAGCTAGGAAACAATTTCATGGGATTGTACGAAAACCAAGGCGAGGAGCGGTTAATGTATTGGAAACACACGGCACTTGAAGCAAAAGCTGAAATAGAAGAAGGGCAGGGACCGATTTACGCCCGAGTCAACCCGGAGGGTTTTCTCGGGATGTACCAAACGAGTAACGCACCCGTCGATGTTCAGAAATTTAACAGCTTCCAAACAACGTCGTCGTTTTTGTTCGTCCGGGTGGAACCGGACGGAAATCTGAAAGGTTATTATTGGGACGGTTCTAACTGGCTGCTTAACTACCAGGCTATTACTGAAACCTGCGGTTTGCCCAATCCCTGCGGTTCGTACGGTTTGTGCACGCCGGGCGGGTCTGGATGTTCTTGTTTGGAAAACCGAACCCGTTTTGAAGCTGGTGGGTGTTTGGATAGAGGTGATGTTGGGGGAGACTTGTGTGGAGAAGAAGGGATTGGTGGAAGTGGTTACTGGGAACTGAGGAAGAGTGGGGTGGAGCCACCGCATAAGGAGCTACTGGGGCACGTGACGACGTCGTCCCTGGCGGAATGCGAGGGTTTGTGCCAGAAAAATTGTAGCTGTTGGGGAGCGTTGTATAGCAACGACACCGGGTTTTGTTATGTTTTGGACAATCCGATCCAGACCATGTTGGGTACCGGGGATGAGTCAAAGGTGGGTTATTTTAAGGTTAGGAAAGGGGAACGGGGAAGGAATCGGGTTCGGGTCGGGGTTGTGGTTGCGGTTATGGTTATGGTTATGGTTATGGTTGTGGTTATGGTTGTTGGGGTTGGGTTATGGGTGATGAGGTGGAAAAGGAGGAGAGGGACGGCGAATGAGGAGGATTGGGCCTCGCCCGGCCCGTATAAGAATCTGGGGTCTGCTAGTTTTAGATCGATCGAAATGTGCACAAAGGAATAG 1443 0.5149 MLNMFAVLALSLASTLTCFAIATTSIPQELHIGFSATPQSSTSSFQPVLSDPSGNFSLGFLRTNLNQLALTVIHVASSEPFWTANLTHVASWSDTTRLFFNGSLVLSDPKTRVSWSTATNGDSVVLLDTSNLQVHDKGTPIWESFHFPTNTLVQSQNFTAKMSLVSPNRFYSLQLGNNFMGLYENQGEERLMYWKHTALEAKAEIEEGQGPIYARVNPEGFLGMYQTSNAPVDVQKFNSFQTTSSFLFVRVEPDGNLKGYYWDGSNWLLNYQAITETCGLPNPCGSYGLCTPGGSGCSCLENRTRFEAGGCLDRGDVGGDLCGEEGIGGSGYWELRKSGVEPPHKELLGHVTTSSLAECEGLCQKNCSCWGALYSNDTGFCYVLDNPIQTMLGTGDESKVGYFKVRKGERGRNRVRVGVVVAVMVMVMVMVVVMVVGVGLWVMRWKRRRGTANEEDWASPGPYKNLGSASFRSIEMCTKE* 481
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr4g0289 480 PIRSF SLG 1 421 IPR035446 -
Apr4g0289 480 Gene3D - 36 146 IPR036426 -
Apr4g0289 480 PANTHER OS11G0149900 PROTEIN 29 468 - -
Apr4g0289 480 ProSiteProfiles PAN/Apple domain profile. 322 407 IPR003609 -
Apr4g0289 480 Pfam D-mannose binding lectin 82 162 IPR001480 -
Apr4g0289 480 SUPERFAMILY alpha-D-mannose-specific plant lectins 80 265 IPR036426 -
Apr4g0289 480 SMART blect_4 40 148 IPR001480 -
Apr4g0289 480 PANTHER - 29 468 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr4g0289 Apr-Chr4 2421373 2423625 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr4g0289 - - gmx:100814305 654.055
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr4g0289 4 2421373 2423625 Apr4g0289 4 2421373 2423625 ECH