Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr4g0261 ATGGGAAGCGACAGGCGAAGAGGGCGAAGACGAAGAATATCAGATAAGTCTGCCTCCGACTCGCCTTCCCAATCTGACTCCGACAGACCTCGCCGAAGTACTCAGAGCAGTAGCCGCCGGTCACGGCGAGACTCAATTAGCTCCGACGACGATGACAGCGGCGGAAGGAAGAGAAAGTCCTCAAGGACCATCACGGAAGAGGAAATAGCACAATACATGGCTCAAAAGGCCCAAAGAAAGGCAACCAAAGTCGCGAAAAAGTTGAAAACAAATACGGTTTCGGGTTATTCCAATGATTCTAATCCGTTTGGTGACTCTAATCTCAACGAGAAGTTTGTTTGGCGCAAGAAGATTGAGCGTGATGTTTCTCAAGGTGTGTCTATTGATACGTTTTCGGTTAAAGCTGAGAAAAAGAGACAGAGAGAAAGGATGGCGGAAATTGAAAAAGTAAAAAAGAGAAGGGAGGAAAGGGCACTTGAGAAAGCACGACATGAGGAAGAAATGGCACTATTAGCCAGGGAACGTGCTCGAGCTGAGTTTCAGGACTGGGAAAAAAAAGAAGAGGAGTTTCATTTTGATCAAAGCAAAGTTAGGTCGGAAATTAGATTGCGTGAAGGGCGTGCCAGACCAATTGATGTCCTAACCAAGCACCTCAATGGATCTGATGATCTGGATATAGAAATAAATGAACCATATATGGTCTTCAAGGGTTTGACTGTGAAAGAAATGAACGAGCTTCGTGATGACATTAAAATGCATCTGGACCTTGACAGGGCAACACCAACCCATGTGCAATATTGGGAGGCACTCCTTGTAGTGTGTGATTGGGAGTTAGCTGAAGCTCAAAAAAAGGATGCACTTGATCGAGCTAGGGTGCGTGGAGAAGAGCCTCCTGCTGAGCTGCTTGCAGAAGAAAGGGGTCTGCATTCCAGTATTGTGCCAGATGTGAAGAGGCTTTTGCAGGGGAAGACACATGCAGAGTTGGAGGCTTTACAGGTTCACATTGATTCAGAGATGCGTACTGGTACTGCAAAGGTGGTTGAGTATTGGGAGGCCATTTTGAAACATCTCCACATATACAAGGCCAAGGCTTGTTTAAAGGAAATTCATGCTAAAATGCTACGCAAGCATTTGCAACATCTTGAGCAGCCATTGGAGGATGAAGATACATTGGAGAATGCTCATGTTATGATACCTGAGGAGGAAGTTACTGAGGATGATGTAATAGTTCAATCTGCAGATGAATCTTTCTCACCAGAGCCTGTTAGAGAGGATCAACAAACTGAAGATGAGGCTGGATCATTTTCTCCACAGCTGTTGCATGGTGATGAAAATGAGGAAGCTATTGACCCTGAAGAGGATAGGGCTATGCTGGAGCGGAAACGTATGGCTGTATTAGAAGAGCAGCAAAGACGAATTCAGGAAGCAATGGCATCAAAGCCAGCTTCTTCTGAAGATAATTTTGAGATGAAGGCCCTAAAAGCTATGGGGGCTATGGAAGATGGAGATGCTGTGTTTGGATCTGGTGCTGAAGTGAACCTAGATTCCCAGGTTTATTGGTGGCATGACAAATACAGGCCTAGGAAGCCAAAGTATTTCAACCGTGTTCATACCGGATATGAGTGGAACAAATATAATCAGACTCACTACGATCATGACAACCCGCCTCCAAAGATTGTGCAAGGATACAAATTTAATATCTTCTATCCTGATCTTGTAGACAAGACAAAAGCCCCAACCTACACCATCGAGAAGGATGGCAGCAATGGGGAGACTTGCATCATAAGATTCCATGCAGGGCCACCATATGAAGACATAGCTTTCCGCATTGTGAACAAAGAATGGGAATATTCTCATAAGAAAGGTTTTAAGTGCACATTTGAACGTGGAATTCTGCATGTGTACTTCAATTTCAAACGCCACCGCTACCGTAGATAA 1938 0.4469 MGSDRRRGRRRRISDKSASDSPSQSDSDRPRRSTQSSSRRSRRDSISSDDDDSGGRKRKSSRTITEEEIAQYMAQKAQRKATKVAKKLKTNTVSGYSNDSNPFGDSNLNEKFVWRKKIERDVSQGVSIDTFSVKAEKKRQRERMAEIEKVKKRREERALEKARHEEEMALLARERARAEFQDWEKKEEEFHFDQSKVRSEIRLREGRARPIDVLTKHLNGSDDLDIEINEPYMVFKGLTVKEMNELRDDIKMHLDLDRATPTHVQYWEALLVVCDWELAEAQKKDALDRARVRGEEPPAELLAEERGLHSSIVPDVKRLLQGKTHAELEALQVHIDSEMRTGTAKVVEYWEAILKHLHIYKAKACLKEIHAKMLRKHLQHLEQPLEDEDTLENAHVMIPEEEVTEDDVIVQSADESFSPEPVREDQQTEDEAGSFSPQLLHGDENEEAIDPEEDRAMLERKRMAVLEEQQRRIQEAMASKPASSEDNFEMKALKAMGAMEDGDAVFGSGAEVNLDSQVYWWHDKYRPRKPKYFNRVHTGYEWNKYNQTHYDHDNPPPKIVQGYKFNIFYPDLVDKTKAPTYTIEKDGSNGETCIIRFHAGPPYEDIAFRIVNKEWEYSHKKGFKCTFERGILHVYFNFKRHRYRR* 646
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr4g0261 645 MobiDBLite consensus disorder prediction 1 67 - -
Apr4g0261 645 Pfam Conserved mid region of cactin 173 370 IPR018816 -
Apr4g0261 645 Coils Coil 137 181 - -
Apr4g0261 645 MobiDBLite consensus disorder prediction 32 65 - -
Apr4g0261 645 Pfam Cactus-binding C-terminus of cactin protein 521 645 IPR019134 GO:0005515
Apr4g0261 645 PANTHER BNAC05G02180D PROTEIN 5 645 - -
Apr4g0261 645 SMART CactinC_cactus_3 521 645 - -
Apr4g0261 645 PANTHER POLYGLUTAMINE BINDING PROTEIN 1/MARVEL MEMBRANE-ASSOCIATING DOMAIN CONTAINING 3 5 645 - -
Apr4g0261 645 MobiDBLite consensus disorder prediction 413 451 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr4g0261 Apr-Chr4 2196477 2202261 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr4g0261 K25058 - gmx:100780087 1095.49
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr4g0261 4 2196477 2202261 Apr4g0261 4 2196477 2202261 ECH