Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr4g0249 ATGGCTTTGCCACTTAAGCAGCCTCACTTTGTATTAGTTCCACTTCTAGCACAAGGCCACATGATCCCTATGATAGACATGGCAAGAATTTTGGCGGAGAGAGGGGTTATTGTCACTTTGGTAAGTACCCCTCACAATGCCTCAAGATTTGAGCAAATAATTGTAAGAGCAGCAAAATCCGGGCTTTCAATTCAACTTCTACAAATCCCATTTCCATGCCAAAAAGTGGGACTTCCATTTGGTTGTGACAACCTTGATACTTTACCATCAAGAAACCTACTCAGAAATTTTTATATTGCCCTTGACATGCTGCAAGACCCTTTGGAGCAGTACCTCCAAAACCATGTTTTTCCTCCAAGTTGCATTATATCAGATAAATGCCTCTCTTGGACATCTATAACAGCCAAGAAGTTCAATATTCCAAGACTTGTCTTTCATGGGATGTCCTGTTTTTCATTACTCAGCTCCTATAATATCAAACTCCACAATTCCCACCTTTCATGCACTTCTGACTCAGAACCTTTTGTCATACCAGGAATGCCTCAGAAGATTGAGGTAACCAAAGCACAACTCCCCGGAGCATTTGTGGCTCTACCTGATTTGGATGATTTTAGACACAACATGTATGAGGCTGAAATGTCTGCTTATGGTGTTGTGGTGAATAGTTTTGAAGAATTGGAGCAAGGGTGCGCTAAGGAGTATGAAAAGGCCTTAAACAAGCGGGTTTGGTGCATTGGTCCTGTGTCTCTGTGCAACAACGTTAGTTTGGATAAGTTTGAAAGAGGAAACAAGCCTTCAATTGAAGAGAAACATTGCTTAGAATGGTTAAACTCAATGAAACCAAGATCAGTTGTTTATGTGTGCCTTGGTAGCTTATGTAGGCTCGTTACATCACAATTGATAGAACTTGGGTTGGGTTTAGAAGCATCAAATAAACCATTTATTTGGGTGGTCAAAACTTCAGAAGAAAAATTTTCAGAGCTAAAAAATTGGTTAAAAGATGAAAATTTTGAAGAAAGGGTAAGAGGTAAAGGACTTGTCATAAAGGGTTGGGCTCCACAAACTTTGATACTGTCTCACCCTGCAATTGGTGCATTCTTGACCCATTGTGGCTGGAATTCAACAATAGAAGGTGTGTGCTCCGGGTTGCCAATGATAACTTGGCCTTTATTTGCTGAGCAATTCTTAAATGAAAAATTAATTGTGCAAGTTTTGAAGATTGGAGTTCAAATAGGTGTTGAGGTTCCTGTAAGGTGGGGGGATGAAGAGAAAGTTGGCTTAATGGTGAAGAAAAGTAGAATCATAGAGGCTATAGAGATGTGCATGGTTGAAGGTGAAGAGGGTGAGAAGAGGAGGACCAGAGCAATAGAGCTTGGAAAGATGGCAAGAGGTGCTATAGTAAAGGAAGGTTCATCTCACTTCAACCTTTCATGCTTAATTGAAGATATTACGAAAATTGGTTAA 1464 0.4016 MALPLKQPHFVLVPLLAQGHMIPMIDMARILAERGVIVTLVSTPHNASRFEQIIVRAAKSGLSIQLLQIPFPCQKVGLPFGCDNLDTLPSRNLLRNFYIALDMLQDPLEQYLQNHVFPPSCIISDKCLSWTSITAKKFNIPRLVFHGMSCFSLLSSYNIKLHNSHLSCTSDSEPFVIPGMPQKIEVTKAQLPGAFVALPDLDDFRHNMYEAEMSAYGVVVNSFEELEQGCAKEYEKALNKRVWCIGPVSLCNNVSLDKFERGNKPSIEEKHCLEWLNSMKPRSVVYVCLGSLCRLVTSQLIELGLGLEASNKPFIWVVKTSEEKFSELKNWLKDENFEERVRGKGLVIKGWAPQTLILSHPAIGAFLTHCGWNSTIEGVCSGLPMITWPLFAEQFLNEKLIVQVLKIGVQIGVEVPVRWGDEEKVGLMVKKSRIIEAIEMCMVEGEEGEKRRTRAIELGKMARGAIVKEGSSHFNLSCLIEDITKIG* 488
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr4g0249 487 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 8 485 - -
Apr4g0249 487 CDD GT1_Gtf-like 8 465 IPR002213 GO:0008194
Apr4g0249 487 PANTHER PHOSPHATIDYLCHOLINE:DIACYLGLYCEROL CHOLINEPHOSPHOTRANSFERASE 1-RELATED 2 485 - -
Apr4g0249 487 Gene3D Glycogen Phosphorylase B; 5 271 - -
Apr4g0249 487 PANTHER GLYCOSYLTRANSFERASE 2 485 - -
Apr4g0249 487 Pfam UDP-glucoronosyl and UDP-glucosyl transferase 210 402 IPR002213 GO:0008194
Apr4g0249 487 ProSitePatterns UDP-glycosyltransferases signature. 351 394 IPR035595 -
Apr4g0249 487 Gene3D Glycogen Phosphorylase B; 272 467 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr4g0249 Apr-Chr4 2112732 2114195 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr4g0249 9 487 Glycosyltransferase AT2G36780 51.458 0.0 529
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr4g0249 - - ccaj:109818058 783.482