Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr4g0248 ATGCTCCAAGTCCAAATGGCTTCCATAGAACCTCAACTTCACTTCGTTTTGTTTCCACTGATGGCTCCAGGACACATGCTCCCTATGATAGATCTTGCAACAATCTTAGCACACAGCAACATGATTGTCACCGTAGTCACAACCCCACATAACGCTTCCCGTTTCTCAGAAACCTTCGCTCGTGCCTCACAACATGGTCTTAACCTCCGTTTAGCTCTACTCCAATTCCCATCCAAAGATACTGGATTTCCAGAAGGGTGTGAGAATTTTGACATGCTACCTTCAATGGGCATGGGCCTGAATTTCTTTGCTCCAGCAAACACCATTCTGCACGAACCAGCGGAAAAAATGTTCGAAGAGTTAACACCCAAACCAAACTGCATAATCTCTGACTTTTGTTTTTCATACACAGCCCACATCGCTAAGAAATTCAACATTCCCAGAATTTCTTTCTACGGAGTGAGTTGCTTCTGCCTCGTATGGCTACAAAAGTTGAGTAGTTCGAAGGTTGTTGAGAGCGTAGCCACAGATTCAGAGTACTTAGTCATACCCAACATTCCTGATAAAATTGAGGTGACCAAAGCACAAATCCCACTACCAATGGAGAAAGACCGGAAGAATTTTGCTATTAAAATAGCAGAAGCTGAAATGTTAACTTATGGGGTGGTGGTGAATTCTTTTGAGGAGTTGGAAGAAACATACGTGAGGGATTTCAAGAAGGATAAAAATGATAAAGTGTGGTGTGTTGGTCCAGTTTCGCTTACAAACAAGGAATACTTGGATAGGGCTGATAGAGGGAACAAGGTGTCAAGTGATGCTGAAAATTGCATGAAGTGGCTTGATTTGCAAAAACAAAGGTCAGTAATCTACGCATGTCTTGGAAGTGTTTGCAATTTAACTCCTTTACAGTTTATAGAGCTTGGTATGGCCTTAGAAGCATGCAAAAGGCCTTTCATTTGGGTTATAAGGGAAAAAAATCAAACAGAAGAGTTGAACGAGTGGATTATGGAAACGGGGTTTGAGGAAAAGACTAAAGGGTTGGGCCTTTTGATTCGGGGTTGGGCTCCTCAGGTATTAATACTATCACACCTTGCAATTGGAGGGTTCTTAACACACTGTGGTTGGAACTCTACCTTGGAAGCAATATGTGCTGGCGTGCCACTGCTTACGTGGCCTTTGTTCGGGGATCAGTTTTTCAATGAGAAGTTCGCTGTGCACGTACTAGGAATTGGAGTAAGTGTTGGGGGGGAGTGTCCTTTGAAATGGGGTGAAGAAGAGAAAACAGGGGTCTTGGTGAAGAGGGAGGATGTTGTGAGGGGTATAGAGAAGTTAATGGATGAAGGAAATGAAAGTGAGGAGAGAAGAAAAAGGGTTAGAGAGCTTGCGGAGATGGCTAAGAGAGCTGTGGAAGAAGGAGGAGCTTCTCACTTCAATGTGACCCAGTTGATCCAAGATATCAGGCAATACTCCAACAAAAATTCTGAACAATAA 1491 0.4319 MLQVQMASIEPQLHFVLFPLMAPGHMLPMIDLATILAHSNMIVTVVTTPHNASRFSETFARASQHGLNLRLALLQFPSKDTGFPEGCENFDMLPSMGMGLNFFAPANTILHEPAEKMFEELTPKPNCIISDFCFSYTAHIAKKFNIPRISFYGVSCFCLVWLQKLSSSKVVESVATDSEYLVIPNIPDKIEVTKAQIPLPMEKDRKNFAIKIAEAEMLTYGVVVNSFEELEETYVRDFKKDKNDKVWCVGPVSLTNKEYLDRADRGNKVSSDAENCMKWLDLQKQRSVIYACLGSVCNLTPLQFIELGMALEACKRPFIWVIREKNQTEELNEWIMETGFEEKTKGLGLLIRGWAPQVLILSHLAIGGFLTHCGWNSTLEAICAGVPLLTWPLFGDQFFNEKFAVHVLGIGVSVGGECPLKWGEEEKTGVLVKREDVVRGIEKLMDEGNESEERRKRVRELAEMAKRAVEEGGASHFNVTQLIQDIRQYSNKNSEQ* 497
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr4g0248 496 Coils Coil 441 461 - -
Apr4g0248 496 Gene3D Glycogen Phosphorylase B; 10 277 - -
Apr4g0248 496 CDD GT1_Gtf-like 13 478 IPR002213 GO:0008194
Apr4g0248 496 PANTHER GLYCOSYLTRANSFERASE 10 493 - -
Apr4g0248 496 PANTHER GLYCOSYLTRANSFERASE 10 493 - -
Apr4g0248 496 ProSitePatterns UDP-glycosyltransferases signature. 354 397 IPR035595 -
Apr4g0248 496 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 13 489 - -
Apr4g0248 496 Pfam UDP-glucoronosyl and UDP-glucosyl transferase 285 407 IPR002213 GO:0008194
Apr4g0248 496 Gene3D Glycogen Phosphorylase B; 278 470 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr4g0248 Apr-Chr4 2108841 2111014 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr4g0248 11 494 Glycosyltransferase AT2G36760 53.183 0.0 551
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr4g0248 K13496 K22771 gmx:112997714 769.229
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr4g0248 4 2108841 2111014 Apr4g0248 4 2108841 2111014 ECH