Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr4g0246 ATGACACAGAAACTTGGGATGGATTCAACACCTCTCTGCCGCCTCCACTTTGTTTTCATTCCCTTAATGGCCCCAGGTCATCTTCTTCCCATGGTAGACATGGCGAAATTGTTTGCACGCCGCAAAGTAAAAGTGACCATAGTCACCACACCCCTCAATTCCATCCAATTCCAAGCTAGCATAGATAGAGAAATCCAATCTGGATCACCCATTCAAATTCTCCATGTTCAATTTCCATCTTCAGAGGCTGGAATCCCAGAGGGATATGAAAGCATAGACACCTTGCCTTCTATGGATCTACTAAGCAACTTCAACATCGCTTTACTCATGTTGCAGCAACCACTAGAAGAGCTATTCCAAAAGCTAAGCCCATTTCCAAGCTGCATAATTGCCGACAAACATTTCATATGTGTAGCTGATATTGCCCACAAGTTTAATGTCCCAAGAATAATATTCGATGGGACCAATTGTTTCTTTCTCCTATGCAATCACATTTTACATAATTACAAGGTCTATGAAGCTGTCTCTGATGAAGAGAAATTTGTTGTCCCAGGAATGCCCCACAGAATTGAACTGCGAAGATCTCAGCTACCCGGGATATTCAATCCTGGCACAGACCTCGAGTTGAATGCTTTTCGTGAGAAAGTGAGGGAAGTTGCAGAAAAATCATATGGGATAGTGGTTAATACTTTCGAAGAGTTGGAATCAGAATATGTTAAAGAGTATCAGAGGGTTACTGGACATAGGGTATGGTGTGTCGGTCCTGTATCACTATCCAACAAGGATGACGTGGACAAGGCTGAGAGAAGTAAGAGAAATGCAAATGATGAAGAGAGCAAGTATCTTAAGTGGCTTGATTCGTGGCCTTCGAGGTCAGTGATTTATGTCTGCCTAGGTAGTCTAAACCGTGCAACACCTGAGCAGCTGATAGAGCTTGGATTAGGATTGGAAGCAACAAAAAGGCCATTCATTTGGGTGCTAAGGGGTGCGTATGGAAAAGAGGAAATGGAGAAGTGGTTATTGGAAAATGGGTTTGAAGAGAGGGTAAAAGGGAGAGGGGTTTTGATAAAGGGTTGGGCACCACAAGTGTTGATATTGTCACACACAGCAATAGGAGCGTTTTTGACACATTGTGGATGGAATTCTACACTAGAGGGGATTTGTGCTGGGGTGCCCCTGGTAACTTTTCCTCTGTTTGGTGAACAATTTTATAATGAGAAGGTCATCGTACAAGTGGTGGGGAATGGGGTGAGCGTGGGAGCTGAATGTGTTGTGCACTTGGGAGAGGAACACAAGTCTCGTGTTCAGGTGAGGAGGGAAAATGTTGAGGAATGTATTGAGAAGGTAATGGGTGAAGGCGAAGACAACGGAAAAATAAGGGAAAGAGCTAGAAAGTTTACGGACGTTGCAAGGAAAGCAATAGGTGAAGGTGGATCTTCTTACTGCAACATGTCCCTTCTAATTGATCATATCCTACGTGTCAAAGGGTTAGGCCAATGCTGA 1503 0.4371 MTQKLGMDSTPLCRLHFVFIPLMAPGHLLPMVDMAKLFARRKVKVTIVTTPLNSIQFQASIDREIQSGSPIQILHVQFPSSEAGIPEGYESIDTLPSMDLLSNFNIALLMLQQPLEELFQKLSPFPSCIIADKHFICVADIAHKFNVPRIIFDGTNCFFLLCNHILHNYKVYEAVSDEEKFVVPGMPHRIELRRSQLPGIFNPGTDLELNAFREKVREVAEKSYGIVVNTFEELESEYVKEYQRVTGHRVWCVGPVSLSNKDDVDKAERSKRNANDEESKYLKWLDSWPSRSVIYVCLGSLNRATPEQLIELGLGLEATKRPFIWVLRGAYGKEEMEKWLLENGFEERVKGRGVLIKGWAPQVLILSHTAIGAFLTHCGWNSTLEGICAGVPLVTFPLFGEQFYNEKVIVQVVGNGVSVGAECVVHLGEEHKSRVQVRRENVEECIEKVMGEGEDNGKIRERARKFTDVARKAIGEGGSSYCNMSLLIDHILRVKGLGQC* 501
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr4g0246 500 Pfam UDP-glucoronosyl and UDP-glucosyl transferase 275 419 IPR002213 GO:0008194
Apr4g0246 500 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 15 497 - -
Apr4g0246 500 CDD GT1_Gtf-like 15 480 IPR002213 GO:0008194
Apr4g0246 500 Gene3D Glycogen Phosphorylase B; 271 472 - -
Apr4g0246 500 ProSitePatterns UDP-glycosyltransferases signature. 359 402 IPR035595 -
Apr4g0246 500 Gene3D Glycogen Phosphorylase B; 18 484 - -
Apr4g0246 500 PANTHER GLYCOSYLTRANSFERASE 13 495 - -
Apr4g0246 500 PANTHER GLYCOSYLTRANSFERASE 13 495 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr4g0246 Apr-Chr4 2103612 2105420 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr4g0246 15 494 Glycosyltransferase AT2G36780 49.170 3.52e-167 480
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr4g0246 K13496 - gmx:100820150 814.683
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr4g0246 4 2103612 2105420 Apr4g0246 4 2103612 2105420 ECH