Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr4g0245 ATGGCTTCCCAAACACCACAACTTCACTTTGTCTTATTTCCATTCATGGCCCAAGGTCATATGATCCCCATGATGGACACTGCAAAAATATTGATGCACCACAATGCTATCGTCACAGTAGTCACCACTCCACTTCATGCAACTCGATTCACATCTTTCTTTGATCGTTATATTGGATTAGGCTTTCAAATTAGACTTGTTCAACTTCAATTCCCGTGTGAAAAAGCTGAAGTGCCTCATGGGTGTGAGAGTATTGACATGCTACCCTCACTTGCCACAGCCTGGACTTTCTACGAGGCAACAAGCTTTCTACGACAGCCAGTGGAAAAACTATTTGAAGAGTTAACACCGCCACCGAGTTGCATCATCTCTGACATGTTTTTGCCATACACAATCCACATTTCTAGAAAATTCAATATTCCGAGGATTTCTTTTGCAGGAGTAAGTTGCTTCTTTCTCCTATGTTTGCACAATTTAATTGCATATAATATTGAGGGAAGCATAACCTCTGAATCAGAGTATTTTGTTTTACCCGGTATCCCTGATGAAATTGAAATGACCATCGCCCAAACCGGAATATCAATGGGTGGAAATTGGAAACCGTTTAATGATGAATTATTTGCTGCTGAAATTGCTAGTTATGGGTTAATCACAAATTCTTTTCAAGAGTTAGAGCCATCATATGTAGCAGATTACAAGAAGATTAAAAACAATAAAGTATGGTGTCTTGGACCATTATCACTTAGTAACAAGGATCACTTGGATAAGGCTGAAAGAGGAAACAAGGCCTCAATTGATGAGTGCCACCTAAAGTGCTGGCTTGATTCCCAAAAGCCAAAGACTGTAATCTATGCATGCCTTGGAAGCCTATGCAATATAGCACCACCTCAATTGATGGAGCTTGGGTTTGCCTTAGAAGCGTCGAAAAGACCCTTCATTTGGGTCATCAGAGAAGGAAGTAAATCAGAAGGATTAGAAAAATTGATTAAGGAAGATGGATTTGAGGAAAGGAGCAATGGTAGAAGCCTTCTAATTCGGGGTTGGGCTCCTCAGTTACTGATATTATCACACCCTGCTATTGGAGGGTTTATAACACACTGTGGTTGGAACTCTACCTTAGAAGCAATAAGTGCTGGTGTACCAATGCTTACGTGGCCACAATTTGCAGATCAATTTTACAATGAAAGTTTAGTTGTGCATATATTAAAAGTTGGAGTAAAGGTTGGGGTGGAGAGTCCTGCAGTCAAATGGGGCGAGGAAGTGGAAATTGGTGTTCAAGTGAAGAAGGAAGATATTGGAAGAGCAGTAGAAAGGTTAATGGATGATACAAGCGGAAGTGAAGAAAGAAGAAAAAGGGTTAAAGAACTTGCAGAGATGGCCAACAAAACTGTAGAAAAAGGGGGATCTTCTCACTCTAATGTGACATTGCTCATCCAAGATATCATCCAAAAAATTAATTCACAAATGTGA 1470 0.4007 MASQTPQLHFVLFPFMAQGHMIPMMDTAKILMHHNAIVTVVTTPLHATRFTSFFDRYIGLGFQIRLVQLQFPCEKAEVPHGCESIDMLPSLATAWTFYEATSFLRQPVEKLFEELTPPPSCIISDMFLPYTIHISRKFNIPRISFAGVSCFFLLCLHNLIAYNIEGSITSESEYFVLPGIPDEIEMTIAQTGISMGGNWKPFNDELFAAEIASYGLITNSFQELEPSYVADYKKIKNNKVWCLGPLSLSNKDHLDKAERGNKASIDECHLKCWLDSQKPKTVIYACLGSLCNIAPPQLMELGFALEASKRPFIWVIREGSKSEGLEKLIKEDGFEERSNGRSLLIRGWAPQLLILSHPAIGGFITHCGWNSTLEAISAGVPMLTWPQFADQFYNESLVVHILKVGVKVGVESPAVKWGEEVEIGVQVKKEDIGRAVERLMDDTSGSEERRKRVKELAEMANKTVEKGGSSHSNVTLLIQDIIQKINSQM* 490
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr4g0245 489 CDD GT1_Gtf-like 8 460 IPR002213 GO:0008194
Apr4g0245 489 PANTHER UDP-GLYCOSYLTRANSFERASE 73C5-RELATED 7 484 - -
Apr4g0245 489 ProSitePatterns UDP-glycosyltransferases signature. 348 391 IPR035595 -
Apr4g0245 489 PANTHER GLYCOSYLTRANSFERASE 7 484 - -
Apr4g0245 489 Pfam UDP-glucoronosyl and UDP-glucosyl transferase 273 400 IPR002213 GO:0008194
Apr4g0245 489 Gene3D Glycogen Phosphorylase B; 6 270 - -
Apr4g0245 489 Gene3D Glycogen Phosphorylase B; 271 465 - -
Apr4g0245 489 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 8 482 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr4g0245 Apr-Chr4 2099043 2101094 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr4g0245 6 488 Glycosyltransferase AT2G36760 53.292 0.0 541
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr4g0245 K13496 K22771 gmx:100777426 723.776
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr4g0245 4 2099043 2101094 Apr4g0245 4 2099043 2101094 ECH