Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr4g0226 ATGGATGAAGAGTCCAAGAGAATGGAAGAAGGGCTCAATCCAGCGTTGAAAGGTGAAGGTAAGGGAGAAATGATTAAGAGCAATAACAATAACAATAACGGAGGTTGTATCATTGGGGATGAGAAAGACACAATGGCTAAGGGTGTGGATGAAATAGCAGAACAGGAGCAACCAGCGGTTAAGCAAAAGAGGAAGAGGGTTGCAACTCTTGATGCATTTAGGGGTCTCACAATAGTGTTGATGATATTGGTGGACGATGGTGGTGAAGCTTATCCCCGCATTGATCACTCCCCATGGAATGGATGTACTCTTGCCGATTTCGTTATGCCTTTCTTTCTTTTCATTGTTGGGGTTGCCATAGCTCTTGCTCTAAAGAGAGTCCCCAAGAAAAAGGATGCCGTAAAGAAGATAATCCTTAGGACATTAAAGCTTCTCTTCTGGGGTATACTTTTACAAGGTGGTTACTCTCATGCCCCTGATGATCTTGACTATGGAGTTGACATGAAACATATCCGATGGTGTGGCATTCTCCAGAGAATAGCCCTTGTATATTGTGTCGTAGCTCTAATAGAAACATTTACAACCAAGCTTAGACCCACTACCTTGGGTCCTGGACACCTATCCATTTTCACTGCCTATAAATGGTTTGGGGGCTTCGTGGCATTTCTCATTTATATGATCACAACCTTCACCCTCTACGTTCCAGATTGGAGTTTTGTAGATCATCTAGAGGGTGACGAACTAAAGAGATACACGGTGATATGTGGGATGAGAGGACACCTAGGGCCTGCATGTAACGCTGTTGGGCATGTGGATAGACAAGTTTGGGGTGTTAACCATCTTTATTCTCAACCTGTTTGGAGACGCTTGAAGGCGTGTACATTCAGTTCTCCAGGCGAAGGTCCTTTTCGTGAAGATGCTCCAAGTTGGTGTCGTGCTCCTTTCGAACCCGAAGGCTTGTTGAGTTCTATATCAGCTATCATCTCCGGCACTGTCGGCATCCATTATGGGCACGTCTTGATTCACTTCAAGGATCATTCGGAGAGGCTAAAACAATGGGTCTCAATGGGGTTTGTGTTACTCATACTAGCCATCATTCTTCACTTTACAGATGCTATCCCACTTAACAAGCAACTCTACAGCTTCAGCTATGTTTGTTTCACAGCTGGGGCAGCTGGAATAGTGTTCTCTGCGTTCTACATACTGATCGATGTTTGGGGGCTTCGTACTCCATTCTTGTTCTTGGAGTGGATAGGAATGAACGCTATGCTAGTGTTTGTGATGGCAGCCGAGGGGATCTTCGCAGCATTTGTAAATGGATGGTATTATGAAAATCCACACAACTCACTAGTACATTGGATCAAGAAGCATATATTTGTGAACGTTTGGCACTCAGAGAGGGTGGGAACCCTCTTATATGTCATCTTCGCAGAAATCACGTTCTGGGGAGTGGTTGCTGGCGTTTTGCACAAATTAGGAATATATTGGAAATTGTAA 1497 0.4429 MDEESKRMEEGLNPALKGEGKGEMIKSNNNNNNGGCIIGDEKDTMAKGVDEIAEQEQPAVKQKRKRVATLDAFRGLTIVLMILVDDGGEAYPRIDHSPWNGCTLADFVMPFFLFIVGVAIALALKRVPKKKDAVKKIILRTLKLLFWGILLQGGYSHAPDDLDYGVDMKHIRWCGILQRIALVYCVVALIETFTTKLRPTTLGPGHLSIFTAYKWFGGFVAFLIYMITTFTLYVPDWSFVDHLEGDELKRYTVICGMRGHLGPACNAVGHVDRQVWGVNHLYSQPVWRRLKACTFSSPGEGPFREDAPSWCRAPFEPEGLLSSISAIISGTVGIHYGHVLIHFKDHSERLKQWVSMGFVLLILAIILHFTDAIPLNKQLYSFSYVCFTAGAAGIVFSAFYILIDVWGLRTPFLFLEWIGMNAMLVFVMAAEGIFAAFVNGWYYENPHNSLVHWIKKHIFVNVWHSERVGTLLYVIFAEITFWGVVAGVLHKLGIYWKL* 499
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr4g0226 498 MobiDBLite consensus disorder prediction 1 16 - -
Apr4g0226 498 Pfam Heparan-alpha-glucosaminide N-acetyltransferase, catalytic 66 196 IPR012429 -
Apr4g0226 498 MobiDBLite consensus disorder prediction 1 39 - -
Apr4g0226 498 PANTHER LD22376P 1 498 - -
Apr4g0226 498 PANTHER HEPARAN-ALPHA-GLUCOSAMINIDE N-ACETYLTRANSFERASE-LIKE PROTEIN 1 498 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr4g0226 Apr-Chr4 1916489 1921716 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr4g0226 K10532 - gmx:100819967 894.804
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr4g0226 4 1916489 1921716 Apr4g0226 4 1916489 1921716 ECH
Apr4g0226 4 1916489 1921716 Apr8g0095 8 769807 776885 PCT