Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr4g0220 ATGAGTGTGACCCAGTGGCTGGATCGGGTGTTGGAGCAGCCACTTCATCTTCGTCTACTGAATCAACAAAACATTTTGTGCTCTACGGTCAACATGGAGATCGATAAAGCAATTAGAGAGTGTGATGATCGAAGACTTCAGACCAAGTACAACAACGCCACCTATGTTATTCAGAGAGCTTTAGCTTTGTATTCTATTGAAGAGGTTGCCTTCAGCTTCAATGGAGGAAAGGATTCAACAGTTTTGTTGCACCTACTCAGGGCTGGCTATTTCTTGCATAAAAGAGGGAAAAATAGTGCCAATGGGGATTTAAAAAATTTTCCAATTCGGACAATATATTTTGAGACTCCTAGTGCTTTCCCAGAAATCAACTCATTTACCTATGATACAGCTTCTACCTATGGTTTGCAAATTGACACCATTCGCTTAGATTTCAAGTCTGGTTTGGAGGCTTTGTTAAAGGATAAACCTATTCGAGCTATTTTCCTTGGAGTTCGAATTGGAGACCCTACTGCGGTTGGTCAAGAGCAATTCTCCCCTAGCTCACCCGGGTGGCCACCTTTCATGAGAGTGAATCCCATTTTAGATTGGTCATACAGAGATGTATGGGCCTTCCTTTTAACATGCAAGGTGAACTATTGCAGCCTTTACGATCAAGGTTATACATCAATTGGGAGCATATATGACACAGTTCCCAACTCTTTATTAAGCATTAGCAACGCTTCCAATAAATTCAAACCAGCATATCTACTTGCTGATGGAAGATTAGAGAGGGCAGGGAGGGCTAAAAGATCATCTACTGGTGGACAACTACGTGCTGACAGCAATGGCTTGACTACCCCAGATTTGCATAAAAACAGCATGCTCACAGCATCAATCATTGCAGTAGGAGATGAGATTCTGTTTGGCATTGTTGAGGATCAATTGGGACCTTATTTGTGTGGGAAGCTGAATTCCGTTGGTTGGTCTGTGTTTCAACTTTCTGTTGTACACAACAGTATAGATTCTGTGGCCGAAGAAGTTGAGAGACAAAAATCTACAAGTGATATGGTATTTATATATGGAGGTGTAGGTCCACTGCATTCAGATGTTACCTTATCAGGCATTGCAAAAGCTTTTGGTGTTCGTTTGGCTCCTGATGAAGAATTTGAGGAGTATCTCAGGCATATTATTGGTGATCAGTGTACTGGTGACCGCAATGAGATGGCTCAATTGCCTGAGGGCATAACTGAATTATTGCATCATGAGGAGTTGTCTGTGCCCTTGATCAAGTGCCAAAATGTAATAATTCTAAGTGCAACAAATGTTTTGGAGCTGGAAAGGCAGTGGGACTGTTTGATTGAATTAACAAAATCAAGTGACCTACTAGCGTTGCTGGAACCATATGTATCAAAGCATGTGACAACTAATCTCTCAGATGTTGAAATTGCTCAACCTTTGTCAAAGCTTTGCCTTGAATTTCCGGACCTTTATATTGGGTGTTATCGCAAAGCCAGATATGGATCCCTTATAGTAAGCTTCAAAGGAAAGGACCAAACACGCCTTGAATCAGCTATAAAAGCATTGCACAAGAAGTTTCAACCTGGTGCTTTCGTTGAGATGAACTAG 1608 0.4148 MSVTQWLDRVLEQPLHLRLLNQQNILCSTVNMEIDKAIRECDDRRLQTKYNNATYVIQRALALYSIEEVAFSFNGGKDSTVLLHLLRAGYFLHKRGKNSANGDLKNFPIRTIYFETPSAFPEINSFTYDTASTYGLQIDTIRLDFKSGLEALLKDKPIRAIFLGVRIGDPTAVGQEQFSPSSPGWPPFMRVNPILDWSYRDVWAFLLTCKVNYCSLYDQGYTSIGSIYDTVPNSLLSISNASNKFKPAYLLADGRLERAGRAKRSSTGGQLRADSNGLTTPDLHKNSMLTASIIAVGDEILFGIVEDQLGPYLCGKLNSVGWSVFQLSVVHNSIDSVAEEVERQKSTSDMVFIYGGVGPLHSDVTLSGIAKAFGVRLAPDEEFEEYLRHIIGDQCTGDRNEMAQLPEGITELLHHEELSVPLIKCQNVIILSATNVLELERQWDCLIELTKSSDLLALLEPYVSKHVTTNLSDVEIAQPLSKLCLEFPDLYIGCYRKARYGSLIVSFKGKDQTRLESAIKALHKKFQPGAFVEMN* 536
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr4g0220 535 SMART MoCF_biosynth_3a 292 425 IPR001453 -
Apr4g0220 535 Pfam Probable molybdopterin binding domain 293 388 IPR001453 -
Apr4g0220 535 SUPERFAMILY Molybdenum cofactor biosynthesis proteins 288 414 IPR036425 -
Apr4g0220 535 CDD PAPS_reductase 68 225 IPR002500 GO:0003824
Apr4g0220 535 PANTHER FAD SYNTHASE-LIKE 32 526 - -
Apr4g0220 535 Gene3D HUPs 21 265 IPR014729 -
Apr4g0220 535 SUPERFAMILY Adenine nucleotide alpha hydrolases-like 43 220 - -
Apr4g0220 535 Pfam Phosphoadenosine phosphosulfate reductase family 69 231 IPR002500 GO:0003824
Apr4g0220 535 Gene3D - 287 446 IPR036425 -
Apr4g0220 535 PANTHER FAD SYNTHETASE-RELATED FMN ADENYLYLTRANSFERASE 32 526 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr4g0220 Apr-Chr4 1868781 1877514 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr4g0220 - - gmx:100816619 927.932
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr4g0220 4 1868781 1877514 Apr4g0220 4 1868781 1877514 ECH