Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr4g0198 ATGGAGTCAAAGAGTAAAATGGAAGCAGAGACATTAAGTGCTAACCACCCGCCTAGCTTTCTTCATCGGTCCCTTCCTGCTGTTGTACCGATGCTTTTGATTTCAATTGGATATGTTGACCCTGGAAAGTGGATAGCAGTTGTTGAAGGTGGTGCACGGTTTGGGTTTGATCTGATGGCTTTCATGCTTATTTTCAATTTTGCTGCTGCCTTCTGTCAGTACATATCTGCAAAGATTGGTGTAATTACAGGAAAAAACCTTGCTCAGGTTTGCAGTAATGAGTATGATACATGGACATGCATGCTCCTTGGAATTCAAACAGAACTTTCAGTGATAATGCTTGACCTTAACATGATCTTGGGCATGGCACAAGGATTAAATCTTATTTTTGGGTGGGACTTGTTCACTTGTGTCTTTTTAACTGCCATCGGTGCTGTTTTTCATATACTTCTTGCTGTCCTGCTTGACTTTGAAAAGGCAAAAATTCTTGGCCAGTTTGTGGCATGCTTTGTATTGCTTTCTTTTATACTTGGACTACTCATCAATCAACAAGAAATTCCATTTTCCATGAATGGAATACTAACAAGATTGAGTGGTGAGAGTGCATTTGTGCTAATGAGTCTTCTCGGAGCAAATCTTGTGCCTCACAACTTTTACCTTCATTCCTCTATTGTGCAGTGGCATCAGGGGCCAACAAGCACTTCTAAGAATGCATTGTGTCATAACCATTTTTTGGCCATATTATGTGTTTTCAGTGGTCTTTATTTGGTAAATAATATGCTGATGACTGCATCAGCAAATGAGTTCTACAGTACAGGTCCTGTTCTACTTACTTTTCAGGATGCATTGTCACCAATGGAACAGGTATTGCGGAACCCAATAGCTCTGCTTGGTTTTTTGCTCATTTTGTTTCTCGCAAATCAAACCACGGCATTTACTTGGAGTTTAGGTGGAGAAGTGATAGTGCATGGTTTCTTAAAATTGGATATTCCAGGTTGGCTACATTATGCTACAATTAGAGTTATTGCTGTTTTGCCTGCCCTTTATTGTGTATGGAGTTCAGGAGCTGAAGGGATGTATCAGCTACTTATATTCACTCAAGTTTTGGTAGCTCTCCAACTTCCATCTTCTGTGATCCCTCTTTTTAGAGTTGCTACATCTAGATCAATAATGGGTGTGCACAAGCTTTCCCAGTTTCTGGAACTTTTGGCATTGGTCACATTTATTGGGATGCTTGGCTTGAACATTGTCTTTGTGGTGGAAATGATATTTGGCAATAGTGATTGGGTGGGTGATTTGAGATGGAATGTGAGGAGTGGTGTGTCTCTCTCATATTTAGTTCTTCTTACTACTGCTTTTATGTCATTATGTTTGATGCTTTGGTTAGCTGCTACACCTTTAAAATCTGCAAGTGTCCAAGTAGGTGCTCAGGCATGGAACTGGGATGTGCCAGAGACTGTGCCAAATCCAACAGCTGATGGTGAGAAATCATATTTAACTGAAACAAGGTGTCGTGAAGATTCATTGGTGCTGGTGGAGCAACCAGAACCAGCTCTAGCAAGGACCTCTGAATACTCAGATGTGTCGCTTCCAAGTTTTTGTCCTAATCTACCTGAAACTATAATGGAACCCGATCCCCTTGTGAATGATGTCAGGGGGAATCATTCTATTACATCATCAGCTTCCACATCAGAGTCAGAGGCAGTATCAACTGTAGTCAGTGAGATTTCTGATTCTCGATTGGAATACACCAAAACTATAAAAATGGAAACAAGTACCCCAATTGAGCGAACTATGGAAGTTGAAGAAGATTCAAATGCTGAAAGGGATGATGATGATGGAGATTCATGGGAAACTGAAGAACCTTCCCGGGTGGTATCAGCAAGTGTCCCATCTTCAACATCAGATGGCCCTGCATCATTCAGGAGTCTCAGTGGGAAGAGTGATGAAGGTGGGAATAGCTGTGGAAGTCTTTCAAGGATAGAAGGCTTAGGTCGTGCAGCAAGGCGTCAGCTAGCTGCTTTTCTTGATGAATTCTGGGGACAACTTTATGATTTCCATGGGCAAGTAACCCAGGAGGCTAAGGCTAAAAAAATTGATCTTTTGCTGGGACTGGGTGTAGATTCAAGACTCACCAGTACCTTGCAGAAAGTGGATGCAAGTGGAAAGGACTATTCCGAGTACTTATTACCTGTGGGAGGTAGAACTTCTGACATTTTGGGGAACTCTCCATATGACTCTTCCAAGCAGCCTAGGATGCAAAGTACTTCAGAGTCTTCATATGGTCTTCAAAGGAGTTCTTCCTCAATGCGGGCATATCCCATCCAATTATCGGATGCATATGCACGGATCTCTAGCCACAATCCTTTTGATTCTAGTGAGAGGCGTTATTACAGTGTGCGCAATCTACATTCATCCGAAGCTTGGGATCATCAGCCAGCTACCGTACATGGTTATCAGGCTGCATCCTATCGTAGCCGTGTTGGTAAAGACAGAAATTCTGATAACATAAATGGTTCAGTGGACTTGTTGCTGAAATCCCCTTCCATAGGTAATACAAACTACAGGGATTCACTTGCATATGCTTTGGGGAAAAGGCTGCATAGTGGTTCAGGTGTAGGCCAACCCCCAGGGTTCCAAAATGTAACTGTCTCTAGAAATTGCCAATTGCAATCGGAGAGATCCTATTATGATTTTTGCTCCTCTGGACCTGCAGATAATACAGTCAATTCAGTTAATTCGAAGAAGTACCACAGCTTGCCAGACATTTCAGGAATCCCTAACCGGGCTGGTTATGTCTCTGATAAAAATGTTCCATGGGATGGTTCTGCTGGATATGGGACTTTTGCTGGTATGACGGGTTATGACCAGTCATTATATTCGAATTCTGGATCAAGAACAGGGACTCATTTGGCCTTTGATGAACTCTCTCCATCAAAAGTTTACACAGAGGCACTCTCTTCACAGTTGAGTTCTGGTTTTGATGCTGGATCCCTCTGGTCTAGACAGCCTTTTGAGCAGTTTGGTTTACCTGATAAGATACAAAATGTTGCAATGGAAAGTGTCAGAAGTAGGCCTAATGCAATTGTTCAAGAAACTACTTCATTTGTAGATATAGAGGGGAAACTTCTTCAGTCTGTTAGGGTTTGCATTGTGAAGCTCTTAAAACTGGAAGGGTCTGATGGGTTGTTTAGACAGAACGGTGGAGCTGATGAGGATCTGATTGATCGTGTAGCTGTGAGGGAGAAGTTTGTTTATGAAATTGAAACTAGGGAAATGAATCAGGTCATTCACATGGGCGAAGCTCATTATTTTCCTTCTGATAGGAAATCTGGTTCTTCAATGAAGAATAACGAGGCAAGTTCCTCAGGTTTTTCAGTGTCCTCGGTTCCTAATTGCGGGGAGGGATGTATATGGAGATCAGACTTAATAATAAGCTTTGGGGTGTGGTGTATCCATCGTATTCTTAACCTCTCACTTGTGGAAAGCCGGCCAGAGCTTTGGGGGAAATACACGTATGTGCTCAATCGCCTCCAGGGCATCATTGATCCGGCTTTTTTCAAGCCTCGTAGCCCCTTGGCCCCATGCTTTTGTCTTCAAGTGCCAATGACGCATCAGAAGTTAAGCCCCCATCTTTACAATGGGATGCTACCCCCAACTGCACAATCGGGCCGGGGCAAATGCACAACTGCATCAACGTTGCTTGAACTTATCAAGGATGTGGAACTTGCCGTCTCTAGCAGGAAAGGACGTACCGGAACTGCAGCTGGTGATGTGGCTTTCCCAGAGGGAAAGAAAAATTTGGCGTCTGTTCTCAAACGGTATAAGCGGAGGTTATCCAACAAGTCCGTTGGCACTCACGACGGGATCGGTTCACGCAAGATCCCCTCGTTAGCACTATACAACCAATAG 3912 0.431 MESKSKMEAETLSANHPPSFLHRSLPAVVPMLLISIGYVDPGKWIAVVEGGARFGFDLMAFMLIFNFAAAFCQYISAKIGVITGKNLAQVCSNEYDTWTCMLLGIQTELSVIMLDLNMILGMAQGLNLIFGWDLFTCVFLTAIGAVFHILLAVLLDFEKAKILGQFVACFVLLSFILGLLINQQEIPFSMNGILTRLSGESAFVLMSLLGANLVPHNFYLHSSIVQWHQGPTSTSKNALCHNHFLAILCVFSGLYLVNNMLMTASANEFYSTGPVLLTFQDALSPMEQVLRNPIALLGFLLILFLANQTTAFTWSLGGEVIVHGFLKLDIPGWLHYATIRVIAVLPALYCVWSSGAEGMYQLLIFTQVLVALQLPSSVIPLFRVATSRSIMGVHKLSQFLELLALVTFIGMLGLNIVFVVEMIFGNSDWVGDLRWNVRSGVSLSYLVLLTTAFMSLCLMLWLAATPLKSASVQVGAQAWNWDVPETVPNPTADGEKSYLTETRCREDSLVLVEQPEPALARTSEYSDVSLPSFCPNLPETIMEPDPLVNDVRGNHSITSSASTSESEAVSTVVSEISDSRLEYTKTIKMETSTPIERTMEVEEDSNAERDDDDGDSWETEEPSRVVSASVPSSTSDGPASFRSLSGKSDEGGNSCGSLSRIEGLGRAARRQLAAFLDEFWGQLYDFHGQVTQEAKAKKIDLLLGLGVDSRLTSTLQKVDASGKDYSEYLLPVGGRTSDILGNSPYDSSKQPRMQSTSESSYGLQRSSSSMRAYPIQLSDAYARISSHNPFDSSERRYYSVRNLHSSEAWDHQPATVHGYQAASYRSRVGKDRNSDNINGSVDLLLKSPSIGNTNYRDSLAYALGKRLHSGSGVGQPPGFQNVTVSRNCQLQSERSYYDFCSSGPADNTVNSVNSKKYHSLPDISGIPNRAGYVSDKNVPWDGSAGYGTFAGMTGYDQSLYSNSGSRTGTHLAFDELSPSKVYTEALSSQLSSGFDAGSLWSRQPFEQFGLPDKIQNVAMESVRSRPNAIVQETTSFVDIEGKLLQSVRVCIVKLLKLEGSDGLFRQNGGADEDLIDRVAVREKFVYEIETREMNQVIHMGEAHYFPSDRKSGSSMKNNEASSSGFSVSSVPNCGEGCIWRSDLIISFGVWCIHRILNLSLVESRPELWGKYTYVLNRLQGIIDPAFFKPRSPLAPCFCLQVPMTHQKLSPHLYNGMLPPTAQSGRGKCTTASTLLELIKDVELAVSSRKGRTGTAAGDVAFPEGKKNLASVLKRYKRRLSNKSVGTHDGIGSRKIPSLALYNQ* 1304
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr4g0198 1303 MobiDBLite consensus disorder prediction 544 571 - -
Apr4g0198 1303 MobiDBLite consensus disorder prediction 740 767 - -
Apr4g0198 1303 MobiDBLite consensus disorder prediction 552 571 - -
Apr4g0198 1303 PANTHER ETHYLENE-INSENSITIVE PROTEIN 2 20 1187 - -
Apr4g0198 1303 PIRSF EIN2 7 1299 IPR017187 GO:0009873
Apr4g0198 1303 PANTHER SOLUTE CARRIER PROTEIN FAMILY 11 MEMBER 20 1187 IPR001046 GO:0016020|GO:0030001|GO:0046873
Apr4g0198 1303 PRINTS Natural resistance-associated macrophage protein signature 103 129 IPR001046 GO:0016020|GO:0030001|GO:0046873
Apr4g0198 1303 PRINTS Natural resistance-associated macrophage protein signature 205 228 IPR001046 GO:0016020|GO:0030001|GO:0046873
Apr4g0198 1303 PRINTS Natural resistance-associated macrophage protein signature 307 326 IPR001046 GO:0016020|GO:0030001|GO:0046873
Apr4g0198 1303 PRINTS Natural resistance-associated macrophage protein signature 335 352 IPR001046 GO:0016020|GO:0030001|GO:0046873
Apr4g0198 1303 PRINTS Natural resistance-associated macrophage protein signature 367 386 IPR001046 GO:0016020|GO:0030001|GO:0046873
Apr4g0198 1303 Pfam Natural resistance-associated macrophage protein 44 397 IPR001046 GO:0016020|GO:0030001|GO:0046873
Apr4g0198 1303 MobiDBLite consensus disorder prediction 622 655 - -
Apr4g0198 1303 MobiDBLite consensus disorder prediction 589 656 - -
Apr4g0198 1303 MobiDBLite consensus disorder prediction 739 767 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr4g0198 Apr-Chr4 1643106 1651252 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr4g0198 7 1294 Miscellaneous Gene Families AT5G03280 52.082 0.0 1242
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr4g0198 - K14513 gmx:100813034 2018.05
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr4g0198 4 1643106 1651252 Apr4g0198 4 1643106 1651252 ECH