Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr4g0186 ATGGCAAAGGTATTCCATTTCCTCCCTCTCCTCATCCTCAGCATGTTCATCCAAACAATTCGTGCTCAAACAACAGCTCCAGCACCATCAGGACCCACCAACATCACCCAAGTCCTAGAAAAAGCAGGGCAATTCACAACCTTCATGAAACTTCTCAAAGCAACACAAGTAGCTGATCGCATCAATTCTCAACTCAACAACTCAAACCAAGGCTTAACCATCTTTGCACCCACTGATAATGCGTTCTCAAGTCTAAAAGCAGGAACACTAAACTCCATCAACACCCAAGATCAACTCCAGCTGTTGCAGTTCCATATACTCCCAAATCTCTACACAATGTCACAGTTCCAAACAGCAAGTAACCCATTGCACACACAAGCTGGGAACAGTGATGATGGAGAGTACCCTTTGAATGTTACCACCTCAGGGAACCAAGTGAATGTAACAACTGGGGTGGTGGATACAACAGTGTCCAATGTTATATATAGTGATAACCAACTTGCGGTGTATCAGGTGGACAAGGTGCTCCTTCCTATGGCACTCTTTGGCCAAGCGCCGACAGCGGCGCCGGCGGAGGCTCCGGCACCGACAAAGCCGGAGAAAAATGTCCGGGCGGCTGATTCTCCGACAGGGTCGTCGGATACATCGGTTGATGCTTCGAGTGCTGTGAGTCTGAAACTAAATAAGCAAAGAGTTAAGGGTGTTACTATGACCGTTGCCATTCTTGCTTCTTTGTGGATGTAG 744 0.4745 MAKVFHFLPLLILSMFIQTIRAQTTAPAPSGPTNITQVLEKAGQFTTFMKLLKATQVADRINSQLNNSNQGLTIFAPTDNAFSSLKAGTLNSINTQDQLQLLQFHILPNLYTMSQFQTASNPLHTQAGNSDDGEYPLNVTTSGNQVNVTTGVVDTTVSNVIYSDNQLAVYQVDKVLLPMALFGQAPTAAPAEAPAPTKPEKNVRAADSPTGSSDTSVDASSAVSLKLNKQRVKGVTMTVAILASLWM* 248
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr4g0186 247 MobiDBLite consensus disorder prediction 189 220 - -
Apr4g0186 247 Pfam Fasciclin domain 44 178 IPR000782 -
Apr4g0186 247 ProSiteProfiles FAS1/BIgH3 domain profile. 32 176 IPR000782 -
Apr4g0186 247 PANTHER FASCICLIN-LIKE ARABINOGALACTAN PROTEIN 11 5 243 - -
Apr4g0186 247 Gene3D FAS1 domain 14 179 IPR036378 -
Apr4g0186 247 SUPERFAMILY FAS1 domain 31 178 IPR036378 -
Apr4g0186 247 MobiDBLite consensus disorder prediction 206 220 - -
Apr4g0186 247 SMART fasc_3 73 179 IPR000782 -
Apr4g0186 247 PANTHER FASCICLIN-LIKE ARABINOGALACTAN PROTEIN 5 243 IPR045003 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr4g0186 Apr-Chr4 1530376 1531244 Dispersed/Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr4g0186 - - gmx:100805219 354.755
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr4g0186 4 1530376 1531244 Apr4g0186 4 1530376 1531244 ECH