Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr4g0143 ATGTCTCGCTTAACACCCAATCCAAACCACTACGATAGATCTCCTTTCTTCAACCAATCCATGGAGCTCGTTCAACTTCCCAACCAACCCATAACCCGAAACCGAACCCATATCTCTCCCACCCTCGGCGAGCTCCTTAAACGCGTCGAAGACGCTCAAAACGACAACACTGCTACTGCTGCACCACCCCACCACGTTCTCGACCTCTCTTCTTTCTCTTCTCACTCTCACCCCTTTGTTCTCTCCTTCACTAACTTAACTTACAGCGTCAAACTCCGCCGCAAGACGGTTCTCACCCCTTTCTTCTTTTCCCCTACCAACGTTTCCCCGCCGGCGAACCACGAGGCCGAGACCAAACCCAACGGCACCAAGATTCTTCTCAATGACATCTCTGGCGAGGCCAGGGACGGCGAAATCATGGCTGTCCTAGGCGCCAGCGGCTCCGGCAAGTCCACGCTCATCGACGCCCTCGCCGACCGAATTTCAAAGGAGAGCCTGAAAGGCACGGTGACCCTAAACGGCGACGTTCTGGAGTCGAGTCTCCTGAAGGTAATATCCGCTTACGTCATGCAAGACGACCTTCTATTCCCCATGCTCACCGTCGAAGAAACCCTCATGTTCTCCGCCCAATTCCGCCTCCCTCGCTCCCTCTCCAAATCCAAGAAGAAAGCACGCGTCCAGGCCCTCATCGACCAGCTCGGTCTAAGAAACGCCGCCACCACAGTCATCGGCGACGAGGGCCACCGCGGCGTCTCCGGCGGAGAACGCCGTCGTGTCTCCATCGGAATCGATATCATCCACGACCCTATTGTGCTGTTCCTGGACGAACCAACCTCCGGCCTCGACTCCACCAGCGCCTTCATGGTGGTAAAGGTGCTCCAGCGAATCGCTCAGAGCGGAAGCATCGTCATCATGTCCATACACCAGCCCAGCTCCAGAATCTTAAGCCTTCTGGACCGCTTGATCTTCCTCTCCCACGGTCAAACCGTCTTCAGCGGCTCTCCGGCGGCACTCCCCCTCTTCTTCTCCGAGTTCGGGCATCCCATACCGGAAAATGAGAACCGCACCGAGTTCGCACTGGATCTCATTCGCGAGTTGGAAGAAGCTCCCGCTGGTACCAAAAATCTAGTGGAGTTCAACAAGTCGTGGCAGCTAAAGAATAAAAACAAAGCCGTCTCGGTCGAAGCCCAAAACGGGACCAAACCCAAAGTGTCTCTGAAGGACGCCATTGGTGCTAGCATTTCCAGAGGGAAACTAGTTTCCGGCGCTAACGGTAACGGGAACAAGTACTCGACGGTGGCAGTTCCGACGTTCGCCAATCCGTTTTGGATGGAGATGGCTGTTATAGGAAAACGGTCTTTAACAAACTCACGGAGAATGCCGGAATTATTCGGAATCCGTTTGGGTGCAGTTTTAGTGACGGGTGGAATCTTGGCGACGATCTTTTGGCACCTTGACAATTCCCCGAAAGGGGTTCAAGAGCGTTTGGGGTTCTTCGCATTCGCCATGTCCACCACATTCTACACCTGCGCCGAAGCCATCCCCGTGTTCCTCCAAGAGCGTTACATCTTCATGAGGGAAACCGCTTACAACGCCTACCGTCGCTCTTCCTACGTCCTCGCGCACTCTATCATTTCCCTCCCTTCCCTCCTTTTCCTCTCTCTTGCCTTCGCCGCCACCACATTTTGGGCCGTGGGCCTCGCTGGCGGCACTTCCGGCTTCCTCTTTTACTTCTTGACCATTGTAGCCTCCTTTTGGGCCGGCAGCTCCTTCGTGACGTTCCTCTCGGGTGTGGTCTCGCACGTGATGCTTGGCTTCACGGTGGTGGTTGCTATATTGGCCTACTTCGTTCTCTTCAGCGGCTTCTTCATCAGCAGAGACAGGATTCCTCCCTACTGGATATGGTTCCACTATCTATCGCTTGTCAAGTACCCCTACGAGGGAGTGTTGCAGAACGAGTTCCATGTTCGTCCTCCCAGATGCTTCGTCAGAGGGATTCAGATGTTCGATAATACGCCGTTGGGTGATGTGCCCGAGACCCTCAAGGTGGAGCTCCTCAAGAGCATGAGCAAGACGCTGGGAATGAACATAAGTAGCTCCACCTGCGTCATCACCGGACTCGATATACTGAAGCAGCAGGGGATCACGCAGCTCAGCAAGTGGAACTGCTTGTGGATCACCATTGCTTGGGGATTCTTCTTTCGCTTTCTCTTTTATTTGACGCTTCTCTTTGGGAGCAAGAACAAAAGGAGTTAG 2256 0.5421 MSRLTPNPNHYDRSPFFNQSMELVQLPNQPITRNRTHISPTLGELLKRVEDAQNDNTATAAPPHHVLDLSSFSSHSHPFVLSFTNLTYSVKLRRKTVLTPFFFSPTNVSPPANHEAETKPNGTKILLNDISGEARDGEIMAVLGASGSGKSTLIDALADRISKESLKGTVTLNGDVLESSLLKVISAYVMQDDLLFPMLTVEETLMFSAQFRLPRSLSKSKKKARVQALIDQLGLRNAATTVIGDEGHRGVSGGERRRVSIGIDIIHDPIVLFLDEPTSGLDSTSAFMVVKVLQRIAQSGSIVIMSIHQPSSRILSLLDRLIFLSHGQTVFSGSPAALPLFFSEFGHPIPENENRTEFALDLIRELEEAPAGTKNLVEFNKSWQLKNKNKAVSVEAQNGTKPKVSLKDAIGASISRGKLVSGANGNGNKYSTVAVPTFANPFWMEMAVIGKRSLTNSRRMPELFGIRLGAVLVTGGILATIFWHLDNSPKGVQERLGFFAFAMSTTFYTCAEAIPVFLQERYIFMRETAYNAYRRSSYVLAHSIISLPSLLFLSLAFAATTFWAVGLAGGTSGFLFYFLTIVASFWAGSSFVTFLSGVVSHVMLGFTVVVAILAYFVLFSGFFISRDRIPPYWIWFHYLSLVKYPYEGVLQNEFHVRPPRCFVRGIQMFDNTPLGDVPETLKVELLKSMSKTLGMNISSSTCVITGLDILKQQGITQLSKWNCLWITIAWGFFFRFLFYLTLLFGSKNKRS* 752
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr4g0143 751 Pfam ABC-2 type transporter 448 654 IPR013525 GO:0016020|GO:0140359
Apr4g0143 751 Pfam ABC transporter 127 279 IPR003439 GO:0005524
Apr4g0143 751 Gene3D - 115 340 IPR027417 -
Apr4g0143 751 ProSitePatterns ABC transporters family signature. 251 265 IPR017871 GO:0005524
Apr4g0143 751 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 112 351 IPR003439 GO:0005524
Apr4g0143 751 PANTHER ABC TRANSPORTER G FAMILY MEMBER 28 39 744 - -
Apr4g0143 751 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 120 338 IPR027417 -
Apr4g0143 751 PANTHER ABC TRANSPORTER G FAMILY MEMBER 16 39 744 - -
Apr4g0143 751 SMART AAA_5 136 351 IPR003593 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr4g0143 Apr-Chr4 1227577 1229832 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr4g0143 126 377 Calmodulin-binding Proteins AT2G36910 26.154 7.97e-11 63.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr4g0143 K05681 - gmx:100781319 1180.62