Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr4g0137 ATGGTCATGAATCATCAACATCCGCATCAACCTCATCATCTCTCAGAACCCAACACCCCAACAACCCCAAGACCCACCCTCTTCCTCTCCACTTCCGGCAAATCCCTTCTCGTTTCCAACTCCAACAAATCCCTTCTTCTCTCAAATTCCGGTAAGCGCCTCGACACACCGAGAAAAAAATATGTCAAACAGGTCACCGGCCGCCACAACGACACCGAACTCCACCTCGCCGCCCAGCGCGGCGATGTCGCAGCCGTCCGCCAAATCCTCGCCGACTTTGATTCCCACATGATCGGAAGCCTGAGCGGCGCCGAGTTCAACGCCGAGGTGGCCGACATTAGGTCTGCCATCTTCAATGAGGTCAATGAGTTGGGAGAAACCGCCCTCTTCACCGCCGCTGACAAAGGCCACCTCGACATCGTGAAGGAGCTCCTCCCTTACACCACCACCCAAGCCCTTTCCTTCAAAAACCGCTCCGGTTTTGATCCCTTGCATATTGCCGCTAGCCAAGGTCATCATGCAATTGTGCAGGTGCTTCTAGATAATGATCCTGGGTTGATTAAGACATTTGCACAGTCAAATGCAACTCCTCTTGTATCTGCTGCTACTCGGGGGCATGCAGATGTTGTTAAGTTGTTGCTGTCGCGGGATCCTAGTCAGTTAGAGATATCTAGGAACAATGGAAAGAATGCACTTCATTTAGCTGCTCGGCAGGGACATGTGGATGTTGTGAAGATATTGCTAGGGAAGGATCCACAACTTGCTCGAAGAACTGATAAGAAAGGACAAACTGCACTACATATGGCTGTTAAAGGGGTTAGCTGTGAAGTGGTGAAGCTGATTCTTGCGGCCGATACAGCAATTGTCATGCTTCCTGACAAGTTTGGCAATACTGCATTGCATGTTGCAACCAGAAAGAAGAGGGCAGAGATAGTGAACGAGCTGTTACTTCTCCCTGACACCAATGTAAATGCCTTAACAAGAGACCACAAGACAGCTCTTGACCTTGCAGAGGGGCTTCCGATATCTGAAGAAATTTTGGAGGTCAAAGAGAGCTTGGTTCGTTGCGGTGCAGTTAAAGCCAATGACCTTAACCAGCCAAAGGATGAATTAAGGAAAACTGTGACACAGATTAAGAAAGATGTTTTTTTTCAGCTTGAACAAACTCGAAAAACAAACAAGAATGTGAGTGGGATTGCCAAGAAGCTACGCAAATTACACAGAGCTGGAATAAACAATGCTGCCAACTCAGTAACTGTGGTTGCTGTGCTATTTGCAACAGTTGCATTTGCTGCAATTTTTACAGTTCCTGGTGGAGATTATGATAATGGGATGGCTGTGATGGTACATTGTGTATCTTTCAAGGCCTTCTATATAACCAATGCTATTTCACTATTTACATCATTGTCTGTGGTTGTGGTTCAAATCACACTTGTTAGAGGGGAGACAAAGGCTGAGAGGAGGGTTGTGGAAGTGATCAACAAGATGATGTGGTTAGCCTCTGTGTGCACCACTGTTTCATTCATTACAGCATCTTATATAGTAATTGGTCGGCATAGTGAATGGGCTGCAATTCTCGTTACTGTTACGGCGGGCGCCGTAATGGGTGGTGTTCTTGGTACCATGACATACTATGTGGTAAAATCCAAACAATTAAGAAGAGTGAGGAAGAAAGAGAAGATCTCAAGGATTGGAACACAATCATGGTGTCTCTCTGATTCTGATGATTCAGAAGTAAATCCAATCTACGCCATTTGA 1758 0.4642 MVMNHQHPHQPHHLSEPNTPTTPRPTLFLSTSGKSLLVSNSNKSLLLSNSGKRLDTPRKKYVKQVTGRHNDTELHLAAQRGDVAAVRQILADFDSHMIGSLSGAEFNAEVADIRSAIFNEVNELGETALFTAADKGHLDIVKELLPYTTTQALSFKNRSGFDPLHIAASQGHHAIVQVLLDNDPGLIKTFAQSNATPLVSAATRGHADVVKLLLSRDPSQLEISRNNGKNALHLAARQGHVDVVKILLGKDPQLARRTDKKGQTALHMAVKGVSCEVVKLILAADTAIVMLPDKFGNTALHVATRKKRAEIVNELLLLPDTNVNALTRDHKTALDLAEGLPISEEILEVKESLVRCGAVKANDLNQPKDELRKTVTQIKKDVFFQLEQTRKTNKNVSGIAKKLRKLHRAGINNAANSVTVVAVLFATVAFAAIFTVPGGDYDNGMAVMVHCVSFKAFYITNAISLFTSLSVVVVQITLVRGETKAERRVVEVINKMMWLASVCTTVSFITASYIVIGRHSEWAAILVTVTAGAVMGGVLGTMTYYVVKSKQLRRVRKKEKISRIGTQSWCLSDSDDSEVNPIYAI* 586
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr4g0137 585 MobiDBLite consensus disorder prediction 1 25 - -
Apr4g0137 585 Gene3D - 38 182 IPR036770 -
Apr4g0137 585 ProSiteProfiles Ankyrin repeat profile. 295 328 IPR002110 GO:0005515
Apr4g0137 585 PANTHER CASKIN 36 582 - -
Apr4g0137 585 SMART ANK_2a 69 98 IPR002110 GO:0005515
Apr4g0137 585 SMART ANK_2a 295 325 IPR002110 GO:0005515
Apr4g0137 585 SMART ANK_2a 159 188 IPR002110 GO:0005515
Apr4g0137 585 SMART ANK_2a 124 153 IPR002110 GO:0005515
Apr4g0137 585 SMART ANK_2a 261 290 IPR002110 GO:0005515
Apr4g0137 585 SMART ANK_2a 227 256 IPR002110 GO:0005515
Apr4g0137 585 SMART ANK_2a 193 222 IPR002110 GO:0005515
Apr4g0137 585 Gene3D - 183 381 IPR036770 -
Apr4g0137 585 Pfam Ankyrin repeats (3 copies) 193 251 IPR002110 GO:0005515
Apr4g0137 585 Pfam Ankyrin repeats (3 copies) 259 324 IPR002110 GO:0005515
Apr4g0137 585 Pfam Ankyrin repeats (3 copies) 74 182 IPR002110 GO:0005515
Apr4g0137 585 ProSiteProfiles Ankyrin repeat profile. 227 259 IPR002110 GO:0005515
Apr4g0137 585 SUPERFAMILY Ankyrin repeat 74 338 IPR036770 -
Apr4g0137 585 ProSiteProfiles Ankyrin repeat region circular profile. 159 182 - -
Apr4g0137 585 PANTHER ANKYRIN REPEAT-CONTAINING PROTEIN ITN1 36 582 - -
Apr4g0137 585 Pfam Domain of unknown function 411 515 IPR026961 -
Apr4g0137 585 ProSiteProfiles Ankyrin repeat region circular profile. 227 248 - -
Apr4g0137 585 ProSiteProfiles Ankyrin repeat profile. 159 182 IPR002110 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr4g0137 Apr-Chr4 1177515 1180090 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr4g0137 15 585 Miscellaneous Gene Families AT3G09550 73.083 0.0 847
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr4g0137 - - gmx:100779710 888.256