Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr4g0128 ATGGCCATAGCCGCCACCATTTCCGTTCATCTTACATCTCCCACTCGCCGCTCTCTGGCCTCCGTCAATCTCTTTGGTCCTTCAAGATCCACTTTCCCCACACCACAGCGCACTTTCAAGTACCCTAATTTCCGCCTCGTCGCTTCCTCCATGACCACAGATACCCCCGTCAAAACCTCCTCCTCCTCTTCCTTCCTCCACCACAGAGAGAGTGACTTTCTCCATTTCGCCAAGTACCATGGCCTCGGAAACGACTTCGTTTTGATTGACAATAGAGACTCTTCAGAGCCCAGGATTAGTCCAGAGAAAGCTGTGCAACTCTGTGATCGTAACTTTGGCGTTGGAGCTGACGGAGTTATCTTTGTCTTACCTGGCATCAACGGCACCGACTATACTATGAGGATTTTTAACTCCGATGGTAGTGAACCTGAGATGTGTGGCAATGGAGTGCGATGCTTTGCCAAATTCGTTTCTCAGCTTGAGAATTTACATGGAAGGCATAGTTTTACCATACATACTGGTGCTGGTCTGATTGTTCCTGAAGTCTTGGAGGATGGAAATGTCAGAGTTGATATGGGGGAACCAATTCTTAAAGCATCAGATGTGCCTACTAAATTACCTGCAAATAAGGATAATGCATTGGTCAAATCGGAGCTAAATGTTGATGGAGTTATTTGGAATGTGACCTGTGTTAGCATGGGAAATCCACACTGTGTAACTTTCAGCAAAGAAGGAAGCCAGAATTTGTCTGTTGATGAATTAAAGCTAGCAGAAATTGGCCCAAAATTTGAACATCATGAGGTGTTTCCTGCACGAACTAACACAGAGTTTGTGCAAGTTCTGTCTAATTCTCACCTGAAGATGCGTGTTTGGGAGCGTGGAGCAGGAGCAACCCTAGCCTGTGGAACTGGAGCTTGTGCTACTGTCGTTGCAGCAGTTCTAGAGGGTCGTGCAGGAAGAAATTGCATGGTTGATCTACCTGGAGGTCCTCTTCAGATTGAGTGGAGGGAGAAAGATAATCATGTCTATATGACAGGATCAGCCGAATTAGTTTATTATGGATCTTTGCCTCTTTGA 1077 0.4596 MAIAATISVHLTSPTRRSLASVNLFGPSRSTFPTPQRTFKYPNFRLVASSMTTDTPVKTSSSSSFLHHRESDFLHFAKYHGLGNDFVLIDNRDSSEPRISPEKAVQLCDRNFGVGADGVIFVLPGINGTDYTMRIFNSDGSEPEMCGNGVRCFAKFVSQLENLHGRHSFTIHTGAGLIVPEVLEDGNVRVDMGEPILKASDVPTKLPANKDNALVKSELNVDGVIWNVTCVSMGNPHCVTFSKEGSQNLSVDELKLAEIGPKFEHHEVFPARTNTEFVQVLSNSHLKMRVWERGAGATLACGTGACATVVAAVLEGRAGRNCMVDLPGGPLQIEWREKDNHVYMTGSAELVYYGSLPL* 359
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr4g0128 358 Gene3D Diaminopimelate Epimerase; Chain A, domain 1 58 197 - -
Apr4g0128 358 PANTHER DIAMINOPIMELATE EPIMERASE, CHLOROPLASTIC 35 357 - -
Apr4g0128 358 SUPERFAMILY Diaminopimelate epimerase-like 74 203 - -
Apr4g0128 358 Hamap Diaminopimelate epimerase [dapF]. 74 358 IPR001653 GO:0008837|GO:0009089
Apr4g0128 358 Pfam Diaminopimelate epimerase 76 196 IPR001653 GO:0008837|GO:0009089
Apr4g0128 358 Pfam Diaminopimelate epimerase 230 351 IPR001653 GO:0008837|GO:0009089
Apr4g0128 358 ProSitePatterns Diaminopimelate epimerase signature. 137 151 IPR018510 GO:0005737|GO:0008837|GO:0009089
Apr4g0128 358 Gene3D Diaminopimelate Epimerase; Chain A, domain 1 198 348 - -
Apr4g0128 358 PANTHER DIAMINOPIMELATE EPIMERASE, CHLOROPLASTIC 35 357 IPR001653 GO:0008837|GO:0009089
Apr4g0128 358 TIGRFAM DapF: diaminopimelate epimerase 75 356 IPR001653 GO:0008837|GO:0009089
Apr4g0128 358 SUPERFAMILY Diaminopimelate epimerase-like 218 356 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr4g0128 K01778 - gmx:100784731 637.106