Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr4g0083 ATGAACACAAAAGAAGAGGCTGAACCTCATGAGGCGCCGTCGTCGCCTATGAGGGTCCTGCAGCAGTTATCTGAGGGGGCATTCAGAGCTGCTGGGGAAGCATTGCACAATATGTACTCTGGTGGTGGTGGTAGTGGTGGTGTTGGTGGTGATGGTGGTGGTGGGTCAAGCATGCCACAAATGGGGCCTGGTGTACACAGACGTACTCAAAGTGAACTTGTTACTAGAGGATTTCAACGAAGTAACAGCTATCAGAAATTAAAATCTAATGTGCAAAGGGCTTGGCGGTGGGGTGGCAAGCCCCGTGGAGAAGACCTGTTGGCGAGTTTCAACCCCGAGATCATGGCAAACCAGAAACGTCAGTGGTGTCAGCTTCATCCTAAAACTCAGGATTGTGTAAATTATAAGGAGCCAACATCGCTCTTTGAACATTTTGTGATTGTGGGGCTGCATCCAGATGCTAATTTGGAAGGCGTGGAGCATTCATTTGCAAGAAGGAAGAAGTGGGAAAAAGAGAAAGAATTTATAGATTACAAAAAGCAGCAGCAACAGAGGCCACCAGAACCAATTTTGGAACCTCAGATACTGTTCAAATATCCTCCTGCTAAGAAGCTAACAATGCGTATGAAGGACCTAGCTTCCTTTTGCTTTCCTGAAGGTGTTAAGGCATGGTTGTTGGAGAGAACGCCATCGCTAAGTGAACTAAATGAAATTGTCTATGGACAGGAGCATTTAGGCAGAGATGATCTGTCATTTGTCTTTACAGTCAAGGTAACTTTTTTTATCGATCTTGATCAGGCAGCAGACAATGCAATACTTTATGGAGTTTGCTTACATGTGCCTGAAATTGTTCAGAGGCCCCCTGGTATCTTAGGCATATCATCTCCTTTTTCTCATCGCTCTGGAGTATGCAGCCCTTTTCTGGTTACAGCACCTCGCTGTTACTGTCTTCTGACTAGAGTTCCTTTCTTTGAGTTACACTTTGAGATGTTAAACAGTCTCATTGCACAGGAGCGTCTGAATCGGATAACTCAGTTTGTAAATGATATGAATCTCAATTGTTGCATTCCATCAACAACCAAACTAGATGATCAAATGAGTTCAAATGCTAACTCTCCAGAGAGGGAGTCATTTAGTGACTGGATGGCTTGCGCAATACCTCTTCATGGTGTAACTGTGATTACTGCTTCTGGGACTACTTCTGATGATGAAATTCCACAGTTATCACCCAAAATAGGGGATTCTCACTCTCAATCTCCAGAAAGTTTGACTGCCAGTGATGCTTCAGATTATTGTCAGGTTAGGGATACAGATAAGGATGGTGGGAAGAATCTGCAAGATCATGATAATTGTGCTTTTGAGGCACCAGAAACTCATGATTCTGTTGAAAGAGTGCATGGAAATTGTGAAAATGACAAAATTTCTCTGAAAGTCGAAACACCCTTTTCTGCTCGTTGTCGTGTCTTCGAGAGTCTTGAAAGTTCTGAATCACTTTTCAGTCCAGTTAGAAGCATAGTATCAGAAGATGAGGATGATCTTTTCTCAAATAATGAAAGAGATTATGGGGATGAATTGTTAATGGAATGGGCTATGGAGAATAAGAATGATTTGCTACAGATAGTGTGTAGATATCATGCTCAACCTATTCCACCTCGAGGAAGTGAATTTGTCTTCCGCCCTCTTGAACATCTACAAGCTATTCAGTATATACGACACTCAGTTGCTGCTCTTGGCTTCAGCGAAGATTGCTTAAGTTGTTCTGAACCAGCTCAGGTCACTGCAAAGTTGGCAGATGCTGAGGAAGCTCTTGCATTATCAGTATGGACACTGGCAACTACTTGTCGAGTTCTGTCCCTTGAAAGTGTGCTGACATTAGTAACAGGAGTGTTGTTAGAAAAACAGGTGGTGGTATTATGCCCAAATCTGGGCGTGCTATCTGCCACAGTGCTTTCTCTCATTCCCATGATTCGTCCATTTCAATGGCAGAGTTTACTGCTCCCGGTTTTACCTGGGACCATGAGTGATTTTCTTGATGCACCAGTTCCATATATTGTTGGCATACAGCAAGCACCAGATGATTTGAACAGGAAAACTACTAATCTTGTTCTTGTTAATATATTGACGAATCAGGTTAAAATGTGTCAATTACCCAGACTTCCACAGCAAAAAGAGCTTGTGTCTCAGTTGAGTCCAATTCATGCCAGACTTTCAAGAGAAAGCTCAATTGCTAGAAAGCATCCTATACATAGGTGCAACGAAGTCCAGGCTGAAGCTGCAACTCAGTTTTTGAATATCATGTGGCATTATTTGGAGTCACTTTGTGCAAATTTGAAATCCCACACGATAACTAGTGTACAATCAAATAACGACAGGGTCTCTTTACTTTTTAAAGACAGTTTCATTGATTCCTTTCCTTCTAGGGACCAGGCATTCGTTAAGCTATTTGTAGATACACAGCTCTTCACTGCTTTATCAGACTCTCGTCTTTCAAGCTTTGAGAGTGGCGAGTCATAG 2514 0.4256 MNTKEEAEPHEAPSSPMRVLQQLSEGAFRAAGEALHNMYSGGGGSGGVGGDGGGGSSMPQMGPGVHRRTQSELVTRGFQRSNSYQKLKSNVQRAWRWGGKPRGEDLLASFNPEIMANQKRQWCQLHPKTQDCVNYKEPTSLFEHFVIVGLHPDANLEGVEHSFARRKKWEKEKEFIDYKKQQQQRPPEPILEPQILFKYPPAKKLTMRMKDLASFCFPEGVKAWLLERTPSLSELNEIVYGQEHLGRDDLSFVFTVKVTFFIDLDQAADNAILYGVCLHVPEIVQRPPGILGISSPFSHRSGVCSPFLVTAPRCYCLLTRVPFFELHFEMLNSLIAQERLNRITQFVNDMNLNCCIPSTTKLDDQMSSNANSPERESFSDWMACAIPLHGVTVITASGTTSDDEIPQLSPKIGDSHSQSPESLTASDASDYCQVRDTDKDGGKNLQDHDNCAFEAPETHDSVERVHGNCENDKISLKVETPFSARCRVFESLESSESLFSPVRSIVSEDEDDLFSNNERDYGDELLMEWAMENKNDLLQIVCRYHAQPIPPRGSEFVFRPLEHLQAIQYIRHSVAALGFSEDCLSCSEPAQVTAKLADAEEALALSVWTLATTCRVLSLESVLTLVTGVLLEKQVVVLCPNLGVLSATVLSLIPMIRPFQWQSLLLPVLPGTMSDFLDAPVPYIVGIQQAPDDLNRKTTNLVLVNILTNQVKMCQLPRLPQQKELVSQLSPIHARLSRESSIARKHPIHRCNEVQAEAATQFLNIMWHYLESLCANLKSHTITSVQSNNDRVSLLFKDSFIDSFPSRDQAFVKLFVDTQLFTALSDSRLSSFESGES* 838
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr4g0083 837 MobiDBLite consensus disorder prediction 400 447 - -
Apr4g0083 837 MobiDBLite consensus disorder prediction 432 447 - -
Apr4g0083 837 MobiDBLite consensus disorder prediction 41 70 - -
Apr4g0083 837 Pfam DENN (AEX-3) domain 606 708 IPR001194 -
Apr4g0083 837 Gene3D - 131 359 - -
Apr4g0083 837 Gene3D - 606 802 IPR043153 -
Apr4g0083 837 MobiDBLite consensus disorder prediction 400 431 - -
Apr4g0083 837 PANTHER SUPPRESSION OF TUMORIGENICITY 5 ST5 27 834 - -
Apr4g0083 837 ProSiteProfiles Tripartite DENN domain profile. 389 835 IPR037516 -
Apr4g0083 837 PANTHER BNAA09G10210D PROTEIN 27 834 - -
Apr4g0083 837 Pfam uDENN domain 193 279 IPR005113 -
Apr4g0083 837 SMART DENN_cls 310 709 IPR001194 -
Apr4g0083 837 SMART dDENN_cls 755 828 IPR005112 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr4g0083 Apr-Chr4 723959 732195 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr4g0083 - - gmx:100814487 1310.82
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr4g0083 4 723959 732195 Apr4g0083 4 723959 732195 ECH