Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr4g0079 ATGGAGGACGAGGGTAGTGTAAAAGCAGGTAGTATTGGAAGCAGTTTCAAAGCAGGAAGCATAAGTTTCAGGATTGGGAGTTCATCAATTTGGAGTAACAGTGGTGCGGAAATCTTTGCTAACTCTTTCCACCATCAAGATGATGAAGAGGCTCTCAAATGGGCAGCCATTCAGAAACTTCCTACTGTTGCACGCTTGAGGACAGGCTTGCTCACTTCACCTGAAGGGTTTGCAAATGAGATTGAAGTTCATAAACTTGGGTTGCAAGAAAGGAAAGGTTTGCTTGAAAGATTGGTGAAAGTTGCTGAAGGGGACAATGAGAAGTTCATGCTCAAGCTTAGGGACAGAATTGATAGAGTTGGAATTGCTATTCCTACAATAGAGGTCAGATTTGAGAACATGAATGTTGAAGCAGAAGTTCATGTTGGAAGTAGAGCTTTGCCCACTTTCACTAACTACATGGTTAACAAAGTTGAGGGGCTATTGAACTTGCTTCATGTACTCCCAAGTAAAAAACAACATGTAAATATTCTCCATGAAGTTAGTGGAATCATAAGGCCTGCCAGAATGACATTGCTTTTGGGCCCTCCAAGTTCTGGGAAGACCACACTCCTGTTGGCCTTGGCTGGAAGACTTGATTCAAAACTAAAGTTCACTGGAAATGTGACTTGTAATGGTCACGGGATGAATGAGTTTGTACCCCAAAAAACTGCTGCTTATGTCAGTCAAAATGATCTTCATATTGGAGAAATGACTGTAAGAGAGACATTGGCATTCTCAGCAAGAGTTCAAGGAGTTGGGCCTCGTTATGACTTGCTAGCAGAGGTGTCAAGAAGAGAAAAAGAAGCAAATATTACACCTGATCCAGATATTGATGTTTATATGAAGGCTGTAGCAACTGAAGGCCAAAAAGCAAATTTGATTACCGATTATATTCTGAGGATTTTGGGACTGGAGGTCTGTGCTGATACTATTGTGGGAAATGCAATGTTAAGAGGTGTATCTGGTGGGCAAAGAAAACGTGTTACAACAGGGGAGATGCTGGTTGGACCAGCTAAGGCTCTATTCATGGATGAAATATCTACTGGTTTGGATAGTTCAACAACTTTTCAAGTTGTAAATTCACTCAAGCACTTTATCCACTCTCTCAAAGGAACAGCTGTTGTCTCACTCCTTCAACCAGCACCAGAGACATACAATCTCTTTGATGACATAATTCTACTCTCTGATGGCCAAATTGTGTACCAGGGTCCCCGTGAACATGTTCTTGAGTTTTTCGCTTCCATGGGTTTCAAATGTCCAGAGAGGAAAGGTGTTGCAGACTTTTTGCAAGAAGTGACATCAAGGAAAGATCAAGAGCGATATTGGGCTCACAGAGATCAAACTTACAGATTTGTCACAACCAAAGAGTTTGTAGAGGCATTTCAATCATTTCATGTTGGGAGAAACCTTGCTAATGAACTTGCTACTCAATTTGACAAGTCTAAAAGCCACCCAGCAGCTTTGGCAACCCAAAAGTATGGATTAGGAAAATGGGAACTGTTGAAAGCTTGTTTGTCAAGAGAATATTTACTCATGAAGCGTAATTCTTTTGTCCACATCTTCCAGCTTTGCCAACTTTCTGTAGTGGCCTTTATTGCCATGACCGTTTTCTTAAGGACTGAGATGCACCGAGATTCAGTGACTAATGGTGGAATATATGCGGGTGCATTGTTTTATGGCCTTCTTGTGATTTTATTGGACGGATTTGCTGACCTTGCCGTGACAGTTTCTAAGCTTCCTGTATTTTACAAGCAAAGGGATTTCCTCTTCTTCCCTTCATGGGTCTATGCTCTTCCTTCATGGATCCTAAAAATCCCCATGACTTTTGCACAAGTGGGGATCTGGGTATTCCTCACCTACTATGTTATTGGTTTTGATCCATATATTGGAAGATTCTTCAGGCAATTCCTTCTTCTGTTATTTGTTAACCAAATGGCTTCTGCCTTGTTCCGGTTCATCGGAGCACTTGGTAGGGAACTAACGGTTGCTTTCACAATTGGGTCGTTCGTATTGGCCATCCTTATTGCTATGAGTGGTTTCATCCTGTCAAAAGACAATATGAAAAAATGGTGGTTATGGGGCTTCTGGTCGTCACCTATGATGTATGGACAGAATGCCATTGTAAATAATGAGTTCCTAGGCAAGAGATGGAGACATGTTCTACCTAACTCAACTACGCCACTAGGAATTGAAGTTTTGAAATCCCGGGGGTTCTTCACTCAGTCAAAGTGGTATTGGATTGGTGTTGGGGCACTGATTGGATACACTATAGTGTTCAATATTGGTTACATCCTTGCTCTCACTTACCTGAACCCAATTGTGCAGCATCAAACTGTCAAATCAGAGCAATCTCAAAGCAATGAGCAAGATGGTGGAAGTATATCTACTAGAAGAAAAGAGGAGGACAGAAGAAGAGGAATGGTTCTTCCCTTTGAACCACATTCCATCACCTTCGATGATGTTACATATTCAGTTGACATGCCTCAGGAAATGAGGAATCAGGGAGTTCTTGAGGACAGGTTAGAGCTTTTGAAGGGTGTCAGTGGTGCTTTCAGGCCAGGTGTTCTCACAGCACTAATGGGTTCCACTGGTGCTGGCAAAACGACTCTTATGGATGTACTAGCTGGAAGAAAGACTGGAGGATATATTGGTGGGAACATCACAATTTCTGGCTATCCAAAGAAGCATGAAACCTTTGCAAGAATTTCTGGATATTGTGAACAAAATGATATCCACTCTCCTCATGTTACAGTATATGAATCCTTGCTCTATTCAGCATGGCTTCGATTATCAGCAGAAATCAATTCTGAAACTAGGAAGATCTTCATTGAGGAGGTCATGGAACTTGTGGAGATGAAGCCACTAAGGCATGCAATAGTTGGATTGCCAGGTGTTAATGGTTTGTCAACGGAGCAGCGCAAAAGGTTGACTATAGCTGTTGAACTAGTGGCAAATCCTTCTATAATATTCATGGATGAGCCAACTTCTGGGCTAGATGCAAGAGCTGCAGCTATTGTTATGAGAGCAGTTAGGAACATAGTGGACACTGGGAGAACAGTTGTTTGCACCATCCATCAACCTAGCATTGATATATTTGAATCTTTTGATGAGCTTTTCCTAATGAAGCGAGGAGGGCAAGAGATATATGTGGGACCATTAGGACATCATTCTTCTCATTTAATTAGTTACTTTGAGGGAATTCAAGGTGTCCGTACAATTGAGGATGGCTATAACCCAGCAACGTGGATGTTGGAAGTCACAACTTCAGCAAAAGAAATAGAATTAGGGATTGATTTTGCTGAGGTGTACAAGAATTCAGACTTATACAGGAGAAACAAAGAACTTATCAAAGAATTGAGTGTTCCAGCCCCTGGATCGAAGGACCTTTATTTTCCTTCTAAGTACTCTAGGTCATTTTTCACCCAATGCATGGCTTGCTTATGGAAACAACACTGGTCTTATTGGCGCAATAATCAATACACTGCCCTAAGATTTCTCTACACAACAGCTGTGGCCTTGTTGTTTGGAAGCATATATTGGAACCTTGGCTCTAAAATTAAAAAGCAACAAGATCTTTTCAATGCCATGGGCTCCATGTATGCTGCTGTTCTCCTTCTTGGTATTAAGAATGCAAACTCAGCACAACCATTGGTGGCTGTTGAAAGAACAGTGTTTTATAGGGAAAAAGCTGCTGGAACGTATTCAGCTTTGGCATATGCTTTTGCTCAGGTCTTAATTGAACTACCTTATGTTCTCTTACAAACTGTGGTGTACAGCATTATAGTGTACTCAATGATTGGTTTTGAGTGGACTGTCACTAAATTTTTCTGGTACCTTTTCTTTATGTACTTAACCTTCCTCTACTTTACCTACTATGGCATGATGTCAGCAGCCATGACCCCAAACACATCCATTGCTGTTATACTTTCTGCTGGATTCTATGAAGTATGGAATCTCTTCTCAGGATTCGTAATCCCACGGCCAAGGATGCCTGTGTGGTGGAGATGGTACTATTGGGCAGATCCAGTGGCTTGGACTTTGTATGGGTTGGTGACATCACAGTTTGGAGATATACAAAAACACGTTGAGTTTAATGGTAAAAGTACATCAGTGGAAGACTTTTTGAGAAATTACTTTGGTTATAAGCATGATTTTCTGGGAGTGGTTGCCGCTGTGCTTATAGGATTTTCACTAACTTTTGCATTCATCTTTGCCATGGCTATAAAGACGTTTAATTTCCAACGACGTTAA 4293 0.413 MEDEGSVKAGSIGSSFKAGSISFRIGSSSIWSNSGAEIFANSFHHQDDEEALKWAAIQKLPTVARLRTGLLTSPEGFANEIEVHKLGLQERKGLLERLVKVAEGDNEKFMLKLRDRIDRVGIAIPTIEVRFENMNVEAEVHVGSRALPTFTNYMVNKVEGLLNLLHVLPSKKQHVNILHEVSGIIRPARMTLLLGPPSSGKTTLLLALAGRLDSKLKFTGNVTCNGHGMNEFVPQKTAAYVSQNDLHIGEMTVRETLAFSARVQGVGPRYDLLAEVSRREKEANITPDPDIDVYMKAVATEGQKANLITDYILRILGLEVCADTIVGNAMLRGVSGGQRKRVTTGEMLVGPAKALFMDEISTGLDSSTTFQVVNSLKHFIHSLKGTAVVSLLQPAPETYNLFDDIILLSDGQIVYQGPREHVLEFFASMGFKCPERKGVADFLQEVTSRKDQERYWAHRDQTYRFVTTKEFVEAFQSFHVGRNLANELATQFDKSKSHPAALATQKYGLGKWELLKACLSREYLLMKRNSFVHIFQLCQLSVVAFIAMTVFLRTEMHRDSVTNGGIYAGALFYGLLVILLDGFADLAVTVSKLPVFYKQRDFLFFPSWVYALPSWILKIPMTFAQVGIWVFLTYYVIGFDPYIGRFFRQFLLLLFVNQMASALFRFIGALGRELTVAFTIGSFVLAILIAMSGFILSKDNMKKWWLWGFWSSPMMYGQNAIVNNEFLGKRWRHVLPNSTTPLGIEVLKSRGFFTQSKWYWIGVGALIGYTIVFNIGYILALTYLNPIVQHQTVKSEQSQSNEQDGGSISTRRKEEDRRRGMVLPFEPHSITFDDVTYSVDMPQEMRNQGVLEDRLELLKGVSGAFRPGVLTALMGSTGAGKTTLMDVLAGRKTGGYIGGNITISGYPKKHETFARISGYCEQNDIHSPHVTVYESLLYSAWLRLSAEINSETRKIFIEEVMELVEMKPLRHAIVGLPGVNGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRAVRNIVDTGRTVVCTIHQPSIDIFESFDELFLMKRGGQEIYVGPLGHHSSHLISYFEGIQGVRTIEDGYNPATWMLEVTTSAKEIELGIDFAEVYKNSDLYRRNKELIKELSVPAPGSKDLYFPSKYSRSFFTQCMACLWKQHWSYWRNNQYTALRFLYTTAVALLFGSIYWNLGSKIKKQQDLFNAMGSMYAAVLLLGIKNANSAQPLVAVERTVFYREKAAGTYSALAYAFAQVLIELPYVLLQTVVYSIIVYSMIGFEWTVTKFFWYLFFMYLTFLYFTYYGMMSAAMTPNTSIAVILSAGFYEVWNLFSGFVIPRPRMPVWWRWYYWADPVAWTLYGLVTSQFGDIQKHVEFNGKSTSVEDFLRNYFGYKHDFLGVVAAVLIGFSLTFAFIFAMAIKTFNFQRR* 1431
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr4g0079 1430 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 162 435 IPR003439 GO:0005524
Apr4g0079 1430 Pfam ABC-transporter N-terminal 104 152 IPR029481 -
Apr4g0079 1430 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 830 1082 IPR003439 GO:0005524
Apr4g0079 1430 CDD ABCG_PDR_domain2 827 1065 IPR034003 -
Apr4g0079 1430 Pfam ABC-2 type transporter 393 445 IPR043926 GO:0140359
Apr4g0079 1430 Pfam Plant PDR ABC transporter associated 731 793 IPR013581 -
Apr4g0079 1430 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 174 435 IPR027417 -
Apr4g0079 1430 Gene3D - 163 475 IPR027417 -
Apr4g0079 1430 MobiDBLite consensus disorder prediction 794 820 - -
Apr4g0079 1430 SMART AAA_5 867 1059 IPR003593 -
Apr4g0079 1430 SMART AAA_5 187 419 IPR003593 -
Apr4g0079 1430 PANTHER DRUG RESISTANCE TRANSPORTER-LIKE ABC DOMAIN PROTEIN 22 1430 - -
Apr4g0079 1430 Pfam ABC-2 type transporter 514 726 IPR013525 GO:0016020|GO:0140359
Apr4g0079 1430 Pfam ABC-2 type transporter 1155 1369 IPR013525 GO:0016020|GO:0140359
Apr4g0079 1430 Gene3D - 829 1073 IPR027417 -
Apr4g0079 1430 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 846 1067 IPR027417 -
Apr4g0079 1430 Pfam ABC transporter 858 1010 IPR003439 GO:0005524
Apr4g0079 1430 Pfam ABC transporter 178 360 IPR003439 GO:0005524
Apr4g0079 1430 PANTHER ATP-BINDING CASSETTE TRANSPORTER 22 1430 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr4g0079 Apr-Chr4 696422 704327 Dispersed/Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr4g0079 K08711 - gmx:100813417 2597