Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr4g0078 ATGGAGGATGGGAGTAGTTTCGGGATTGGTAGTCCAACAATTTGGAGGAACAGTGATGCTGAAATTTTCTCAAACTCATTCCACCAAGAGGATGATGAAGAAGCTCTTAAATGGGCTGCAATTCAGAAGCTTCCTACTGTTTCACGTTTGAGGAAAGCTTTGCTTACTTCATCTGAAGGGGAAGCCAGTGAGATCGATGTGCAGAAACTTGGGTTGCAAGAAAAGAGAGCTTTGATTGAAAGACTGGTGAGAACTGCTGAAGAGGACAATGAGAAGTTTTTGCTCAAGCTCAGGGATAGAATTGATAGAGTTGGAATTGATCTTCCTACTATAGAGGTGCGATTTGAGCACTTGAATATTGAAGCTGAAGCTCATGTGGGAACTAGAGCTTTGCCTACCTTCGCTAACTTCATGGTTAATATAGTGGAGGGCGTCTTGAACTCTCTTCATATTCTTCCAAATAGAAAACAACATATAAATATTCTCCAGGATGTTAGTGGAATAATAAAGCCTGGCAGAATGACATTGCTTTTGGGCCCTCCAAGTTCAGGGAAAACCACCCTCCTTTTGGCCTTGGCTGGAAAACTTGATCCAAAATTAAAGTTCTCTGGAAAGGTGACATATAATGGTCATGGAATGAGTGAGTTTGTACCCCAAAGAACTGCTGCTTATGTCAATCAGAATGATCTTCATGTTGGAGAATTGACAGTCAGAGAAACCTTGGCCTTCTCAGCAAGAGTCCAAGGAGTTGGAACTCGATATGACTTGCTCGCAGAATTGTCCAGAAGAGAAAAAGAGGCAAATATAAAGCCTGATCCAGATATTGATGTCTACATGAAGGCTGTAGCAACTGAAGGCCAGAAGGCAAATTTGATAACAGACTATGTCCTAAGGATTTTGGGATTGGAGATCTGTGCTGATACTATTGTAGGAAATGCAATGTTAAGAGGAATCTCTGGTGGACAAAGGAAACGTCTTACAACAGGAGAGATGCTAGTTGGACCAGCTAAAGCACTATTCATGGATGAAATATCTACTGGTTTGGATAGCTCAACAACTTTTCAAATTGTGAATTCACTCAAGCAATATATTCATATTCTCAAAGGAACTGCAGTCATCTCACTCCTGCAGCCAGCTCCAGAGACTTACAATCTCTTTGATGATATTATTTTGATCTCTGATAGTCACACTGTGTACCAGGGTCCACGCGAACACGTGCTTGAATTTTTTGAATCAATGGGTTTCAAATGTCCTGAGAGGAAAGGTGTGGCAGACTTTTTGCAAGAAGTAACATCAAGGAAAGATCAGGAACAGTACTGGGCATGCAAAGATCATCCTTACAAATTTGTCACAGCCAAAGAGTTTTCTGAGGCTCATCAGTCATTTTATGTAGGGAGAAGCCTTGGTGAAGAACTTGCCACTGAATTTGACAAGTCTAAGAGCCATCCAGCTGCCTTGACAACCAAAAAGTATGGACTGGGCAAATGGGAACTGTTGAAAGCTTGCTTATCAAGAGAATATTTACTTATGAGGCGCAATTCATTTGTCTACACCTTCAAGCTTTCTCAACTTGCCGTAATGGCAATTATTGCCATGACCATTTTCCTCAGGACTGAGATGCACAGTGATTCAGTGAGTGATGGAGGTGTATATGTGGGTGCATTGTTCTATGCTGTTGTTGTGATTATGTTCAATGGATTTGCTGAACTTTCCATGGTTGTTTCAAGGCTTCCTGTTTTCTACAAGCAAAGGGACAATCTGTTTTATCCTTCATGGGCATATGCTCTTCCTGCATGGATCCTAAAAATTCCAATGACTTTTGTGGAAGTGGGTATTTGGGTGTGCCTCACCTACCATGTCATTGGTTTTGATCCATATGTTGGAAGATTTTTTAGGCAATACCTTATTCTTGTATTAGTAAACCAGATGGCTTCAGCATTATTCCGATTTACTGCTGCACTTGGGAGAGAAATGATAGCAGCTCTAACATTTGGCTCATTTTCATTGGCCATCCTTTTTTCCATGAGTGGTTTTCTCCTATCAAAAGACAACATAAAAAAATGGTGGCTGTGGGGCTTCTGGATATCACCTATAATGTATGGACAGAATGCCATAGTAAACAATGAGTTCTTTGGAAAGAGATGGAGACATGTTCTACCTAACTCAACTGAGCCACTAGGAGTTGAAATTTTGAAATCAAGGGGGTTCTTCACTCAGTCATATTGGTACTGGATAGGTGCTGGGGCTTTGATTGGATATATATTATTTTTCAACTTTGGTTACATCATTGCTCTCACTTACTTGAACCCACCTGGGAAGCATCAGGCTGTTATATTAGGGGAGCCTCAAAAGAATGAACAGAATAGCAGTGGTAAAAAAGGAACTAATGTGCTGAGCACCTCTTCTGATTCTTTATCCGCTAGGCAAAGAGGAATGGTCCTTCCTTTTGAACCGCATTCTATCACCTTTGATGAAGTAACATATGCTGTTGACATGCCACAGGAAATGAGGAACCGAGGTGTTGTTGAGGAGAAATTGGTTCTTCTGAAGGGTGTCAGTGGAGCTTTCAGGCCAGGTGTTCTCACTGCTCTAATGGGAGTCACTGGTGCAGGCAAAACAACTCTGATGGATGTACTTGCTGGTAGAAAAAATGGGGGATATGTTGGAGGAAACATCACAATCTCGGGATATCCAAAGAAGCAAGAAACATTTGCAAGGATTTCTGGATACTGTGAGCAAAATGATATCCACTCTCCTCATGTTACCGTATATGAATCATTGCTCTATTCAGCTTGGCTCCGATTGTCTTCACACATCAATGCTGAAGCCAGAAAAATGTTCATTGAGGAAGTCATGGAACTTGTGGAACTGAAACCATTAAGGAATGCATTAGTTGGATTGCCTGGTGTTAATGGTCTCTCAACAGAGCAGCGAAAACGGTTGACTATTGCAGTTGAACTTGTGGCAAATCCTTCTATAATATTCATGGATGAGCCAACTTCTGGGCTAGATGCAAGAGCTGCTGCTATTGTCATGAGAACAGTGAGGAACACTGTTGACACAGGAAGAACAGTTGTTTGTACCATCCATCAGCCTAGCATAGATATATTTGAATCTTTTGATGAGCTTTTGCTAATGAAGCAAGGAGGGCAAGAGATATATGTGGGACCACTTGGACATCATTCTTCTCATTTGATTAGTTATTTTGAGGGAATCCAAGGTGTCAATAAGATTAAAGATGGGTATAATCCAGCAACATGGATGTTGGACGTCTCAACTTCAGCTAAAGAAAAAGAATTGGGAATTGATTTTGCTGAGGTGTACAAAAATTCAGAGTTATACAGGAGAAACAAAGCACTCATTAAAGAATTGAGTAGTCCAGCTCCTGGTTCACAAGACCTTTATTTTCCTTCACAATACTCAACATCCTTCTTCACTCAATGCATGGCTTGCTTATGGAAACAGCATTGGTCTTACTGGCGCAATCCTTTATACACAGCCCTAAGATTTCTTTATTCAACTGCTGTATCTGTTTTGCTTGGTAGCATGTTTTGGAACCTTGGCTCCAAAATTGAAAAGCAACAAGATCTTTTCAATGCCATGGGCTCCATGTATGCTGCTGTTCTCCTTCTTGGAATTAAGAATTCTAATGCAGTGCAGCCAGTGGTTGCTGTTGAGAGAACAGTGTTTTATAGGGAAAGAGCAGCTGGAATGTATTCAGCTTTACCATATGCTTTTGCTCAGGTTGTGATTGAGCTCCCATATATACTTGTACAATCTGTAGTCTATTGCGTTATAGTTTATGCAATGATTGGTTTTGAGTGGACTGTTTCCAAATTTTTCTGGTGCCTATTCTTCATGTTTTTCACCTTCCTATACTACACCTACTATGGCATGATGTCAGTGGCAGTGACCCCAAACCAACACATTTCCACTATAGTTTCCTCTGCATTCTATTCAGGATGGAACCTCTTCTCAGGATTTATAGTACCTCGGCCAAGGATCCCAGTATGGTGGAGGTGGTACAGTTGGGCAAATCCTGTGGCTTGGAGTTTGTATGGACTGGTGACTTCACAATATGGAGATAATAAGCAAAACATTGAAACCACTGATGGGACTACAACAATAGAAATCTTTATAAGAAGTCATTTTGGTTTCAAGCATGATTTTCTGGGAGTGGTTGCAGTTGTGATTGTTGCATTCCCAATTGTTTTTGCACTGGTCTTTGCCATCTCAGTGAAGATATTTAATTTCCAAAGGCGTTAA 4266 0.4086 MEDGSSFGIGSPTIWRNSDAEIFSNSFHQEDDEEALKWAAIQKLPTVSRLRKALLTSSEGEASEIDVQKLGLQEKRALIERLVRTAEEDNEKFLLKLRDRIDRVGIDLPTIEVRFEHLNIEAEAHVGTRALPTFANFMVNIVEGVLNSLHILPNRKQHINILQDVSGIIKPGRMTLLLGPPSSGKTTLLLALAGKLDPKLKFSGKVTYNGHGMSEFVPQRTAAYVNQNDLHVGELTVRETLAFSARVQGVGTRYDLLAELSRREKEANIKPDPDIDVYMKAVATEGQKANLITDYVLRILGLEICADTIVGNAMLRGISGGQRKRLTTGEMLVGPAKALFMDEISTGLDSSTTFQIVNSLKQYIHILKGTAVISLLQPAPETYNLFDDIILISDSHTVYQGPREHVLEFFESMGFKCPERKGVADFLQEVTSRKDQEQYWACKDHPYKFVTAKEFSEAHQSFYVGRSLGEELATEFDKSKSHPAALTTKKYGLGKWELLKACLSREYLLMRRNSFVYTFKLSQLAVMAIIAMTIFLRTEMHSDSVSDGGVYVGALFYAVVVIMFNGFAELSMVVSRLPVFYKQRDNLFYPSWAYALPAWILKIPMTFVEVGIWVCLTYHVIGFDPYVGRFFRQYLILVLVNQMASALFRFTAALGREMIAALTFGSFSLAILFSMSGFLLSKDNIKKWWLWGFWISPIMYGQNAIVNNEFFGKRWRHVLPNSTEPLGVEILKSRGFFTQSYWYWIGAGALIGYILFFNFGYIIALTYLNPPGKHQAVILGEPQKNEQNSSGKKGTNVLSTSSDSLSARQRGMVLPFEPHSITFDEVTYAVDMPQEMRNRGVVEEKLVLLKGVSGAFRPGVLTALMGVTGAGKTTLMDVLAGRKNGGYVGGNITISGYPKKQETFARISGYCEQNDIHSPHVTVYESLLYSAWLRLSSHINAEARKMFIEEVMELVELKPLRNALVGLPGVNGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFESFDELLLMKQGGQEIYVGPLGHHSSHLISYFEGIQGVNKIKDGYNPATWMLDVSTSAKEKELGIDFAEVYKNSELYRRNKALIKELSSPAPGSQDLYFPSQYSTSFFTQCMACLWKQHWSYWRNPLYTALRFLYSTAVSVLLGSMFWNLGSKIEKQQDLFNAMGSMYAAVLLLGIKNSNAVQPVVAVERTVFYRERAAGMYSALPYAFAQVVIELPYILVQSVVYCVIVYAMIGFEWTVSKFFWCLFFMFFTFLYYTYYGMMSVAVTPNQHISTIVSSAFYSGWNLFSGFIVPRPRIPVWWRWYSWANPVAWSLYGLVTSQYGDNKQNIETTDGTTTIEIFIRSHFGFKHDFLGVVAVVIVAFPIVFALVFAISVKIFNFQRR* 1422
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr4g0078 1421 Gene3D - 148 459 IPR027417 -
Apr4g0078 1421 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 837 1057 IPR027417 -
Apr4g0078 1421 Pfam Plant PDR ABC transporter associated 715 778 IPR013581 -
Apr4g0078 1421 Coils Coil 72 92 - -
Apr4g0078 1421 SMART AAA_5 171 396 IPR003593 -
Apr4g0078 1421 SMART AAA_5 858 1050 IPR003593 -
Apr4g0078 1421 Pfam ABC-2 type transporter 498 710 IPR013525 GO:0016020|GO:0140359
Apr4g0078 1421 Pfam ABC-2 type transporter 1146 1359 IPR013525 GO:0016020|GO:0140359
Apr4g0078 1421 CDD ABCG_PDR_domain2 818 1056 IPR034003 -
Apr4g0078 1421 PANTHER DRUG RESISTANCE TRANSPORTER-LIKE ABC DOMAIN PROTEIN 7 1421 - -
Apr4g0078 1421 PANTHER ATP-BINDING CASSETTE TRANSPORTER 7 1421 - -
Apr4g0078 1421 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 158 419 IPR027417 -
Apr4g0078 1421 Pfam ABC transporter 849 1001 IPR003439 GO:0005524
Apr4g0078 1421 Pfam ABC transporter 162 344 IPR003439 GO:0005524
Apr4g0078 1421 Pfam ABC-transporter N-terminal 73 137 IPR029481 -
Apr4g0078 1421 Pfam ABC-2 type transporter 377 459 IPR043926 GO:0140359
Apr4g0078 1421 CDD ABCG_PDR_domain1 151 401 IPR034001 -
Apr4g0078 1421 Gene3D - 821 1064 IPR027417 -
Apr4g0078 1421 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 146 419 IPR003439 GO:0005524
Apr4g0078 1421 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 821 1073 IPR003439 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr4g0078 Apr-Chr4 673952 681790 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr4g0078 K08711 - gmx:732607 2492.23