Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr4g0077 ATGGAGGGCGGGGGTAGTTTCAGGATTGGTAGTTCATCAATTTGGAGAAACAGTGATGCTGAAATTTTCTCAAACTCATTCCACCAAGAGGATGATGAAGAAGCTCTAAAATGGGCTGCGATTCAGAAGCTTCCTACTGTTTCACGTTTGAGGAAAGCTTTGCTTACTTCATCTGAAGGGGAAGCCAGTGAGATCGATGTGCAGAAACTTGGATTGCAAGAAAAGAGAGCTTTGCTTGAAAGACTGGTGAGAATTGCTGAAGAGGACAATGAGAAGTTTTTGCTCAAGCTCAGGGACAGAATTGATAGAGTTGGAATTGATCTTCCTACTATAGAGGTGCGATTTGAGAACTTGAATATTGAAGCGGAAGCTCACGTGGGAACTAGAGCTTTGCCTACCTTCACTAACTTCATGGTTAATATAGTGGAGGGCCTGTTGAACTCTCTTCATATACTTCCAAATAAAAAACAACATGTAAATATTCTCCAAGATGTTAGTGGAATAATAAAGCCTGGCAGAATGACATTGCTTTTGGGCCCTCCAAGTTCAGGGAAAACTACACTCCTGTTGGCCTTGGCTGGAAAACTTGATCCAAAACTAAAGTTCTCTGGAAAGGTGACTTATAATGGTCATGGGATGAATGAGTTTGTACCCCAAAGAACTGCTGCTTATGTTAATCAAACTGATCTTCATGTTGGAGAAATGACAGTCAGAGAAACCTTAGCCTTCTCAGCAAGAGTCCAAGGAGTTGGGCCTCGCTATGACTTGCTAGCAGAATTGTCCAGAAGAGAAAAAGAGGCAAACATCAAACCTGACCCAGACATTGATGTCTACATGAAGGCTATAGCAACTGAAGGCCAGAAGGCAAATTTGATAACAGATTATGTCCTAAGGATTTTGGGTCTGGAGGTCTGTGCTGATACGTTTGTAGGAAATGCAATGTTAAGAGGTATCTCTGGTGGACAAAGGAAACGCGTTACAACAGGGGAGATGTTGGTTGGACCAGCAAAAGCCCTTTTCATGGATGAAATATCCACTGGTTTGGATAGCTCAACAACTTTTCAAATTGTGAATTCACTCAAGCAATATGTCCACATTCTCAAAGGAACCGAAGTCATCTCACTCCTGCAGCCAGCACCAGAGACTTACAATCTTTTTGATGACATCATTCTTCTCTCTGATAGTCACATTGTGTACCAGGGTCCTCGCGAACACGTGCTTGAATTTTTCGAATCAATGGGTTTTAAATGTCCTGAGAGGAAAGGTGTGGCAGACTTTTTGCAAGAAGTGACATCAAGGAAAGATCAGGAGCAGTATTGGACACAAAAAGATGTACCATATAGATTCATCACAGCCAAAGAGTTTTCTGAGGCACATCAGTCATTTCATGTAGGGAGAAGCCTTGGTGAAGAACTTGCTACTGAGTTTGACAAGTCTAAGAGCCATCCAGCTGCTTTGACAACCAAAAAATATGGTGTGGGGAAATGGGAACTGTTAAAAGCTTGCTTATCAAGAGAATATTTACTTATGAAGAGAAATTCATTTGTGTACACCTTCAAGCTTTGCCAACTTGCTGTATTGGCAATTATCGCTATGACCATTTTCCTCCGAACTGAGATGCATAGAGATTCAGTCACTCATGGAGGCATATATTCTGGTGCATTGTTCTATGGCGTTGTTGTGATTATGTTCAATGGATTGGCTGAACTTTCCATGGTTGTTTCAAGGCTTCCTGTTTTCTACAAGCAAAGGGATTATCTCTTCTTCCCTTCATGGGTGTATGCACTCCCTGCATGGATCCTAAAAATCCCCATGACTTTTGTGGAAGTTGGTGTTTGGGTATTCCTCACCTACTATGTCATTGGTTTTGATCCATATGTTGGAAGATTGTTCAGGCAATACCTCATTCTTGTACTAGTAAACCAGATGGCTTCAGCATTATTCCGATTTATTGCTGCAATTGGGAGGGACATGACAGTGGCTCTAACTCTTGGGTCATTTACACTGGCCATCCTTTTTTCTATGAGTGGTTTTCTCCTATCAAAAGACAATATAAAAAAATGGTGGCTGTGGGGCTTTTGGATATCACCTATGATGTATGGACAGAATGCCATGGTGAATAATGAGTTCCTTGGAGATAGATGGAGACATGTTCTTCCTAACTCAATTGAGCCACTAGGAGTTGAAGTTTTGAAATCACGCGGTTTCTTCACTCAATCATATTGGTACTGGATAGGTGTTGGGGCTTTGGCTGGATACACATTACTTTTCAACTTTGGCTACATGCTTGCTCTGACATTCTTAAATCCAATTGGGAAACATCAGGCCGTTATATCAGAGGAAGCTCAAAGCAATGAGCAGAATGGTGGTAGTACAAAAGGAACTAATGTGCAAGAAACGGTTGCTGAAGAGACAAATCATAACAACAGAAAAAGAGGAATGGTTCTTCCTTTTGAGCCACATTCCATCACCTTTGATGAAGTAACATATTCTGTTGACATGCCACAGGAAATGAGGAACCGAGGTGTTGCTGAGGATAAGTTGGTTCTTTTGAAAGGTGTTAGTGGAGCTTTTAGGCCAGGTGTTCTCACTGCTTTGATGGGTGTCACTGGGGCCGGAAAAACAACTCTGATGGATGTACTCGCTGGTAGAAAAACTGGGGGATATATTGGGGGGAACATTTCAATCTCTGGTTATCCAAAGAAGCAAGAAACATTTGCCAGGATTTCTGGATACTGTGAGCAAAATGATATCCATTCTCCTCATGTTACTGTGTATGAATCCTTGCTGTATTCAGCATGGCTCCGATTGTCCCCAGACATCAGTGCTGAAACCAGGAAGATGTTCATTGATGAAGTCATGGAACTTGTGGAACTGAAACCACTAAGGAATGCATTAGTTGGATTGCCTGGTGTTAATGGTCTCTCCACGGAGCAGCGAAAACGGTTGACTATTGCAGTTGAACTTGTGGCAAATCCTTCTATAATATTCATGGATGAGCCAACTTCTGGGCTAGACGCAAGAGCTGCTGCTATTGTCATGAGAACAGTGAGGAACACTGTTGACACAGGAAGAACAGTTGTTTGTACCATCCATCAGCCTAGCATAGATATATTTGAATCTTTTGATGAGCTTTTGCTAATGAAGCAAGGAGGGCAAGAGATATATGTGGGGCCACTTGGACATCATTCTTCTCATTTGATTAGTTATTTTGAGGGAATCCAAGGTGTCAATAAGATTAAAGATGGGTATAATCCAGCAACATGGATGTTGGAAGTCTCAACTTCAGCTAAAGAAATGGAATTAGGGATTGATTTTGCAGAAGTGTACAAAAATTCAGAGTTATACAGGAGAAACAAAGCACTCATTAAAGAATTGAGTAGTCCAGCTCCTGGTTCACAAGACCTTTATTTTCCTTCACAATACTCAACATCCTTCTTCACTCAATGCATGGCTTGCTTATGGAAACAGCATTGGTCCTACTGGCGCAATCCTTTATACACGGCCCTAAGATTTCTTTACTCAACTGCTGTTGCTGTTTTGCTTGGTAGCATGTTTTGGAACCTTGGCTCCAAAATTGAAAAGCAACAAGATCTTTTCAATGCCATGGGCTCCATGTATGCTGCTGTTCTCCTTATTGGCATTAAGAATGCCAATGCAGTGCAGCCAGTGGTTTCTGTTGAGAGAACAGTGTTTTATAGGGAAAAAGCAGCTGGAATGTACTCAGCTTTGCCATATGCTTTTGCTCAGGTTCTCATTGAGCTCCCATATGTTCTAGTACAAGCTGTGGTCTATGGCATTATAATTTATGCGATGATTGGTTTTGAATGGACTGTCACTAAAGTTTTCTGGTACCTATTCTTCATGTACTTCACCTTCCTATACTTCACCTACTATGGCATGATGTCAGTGGCAGTGACCCCAAACCAGCACATTTCCTCTATAGTTTCCTCTGCATTCTATTCAGTGTGGAATCTCTTCTCAGGGTTCATAGTCCCACGACCTAGGATCCCAGTATGGTGGAGATGGTACAGTTGGGGAAATCCTGTGGCTTGGAGTTTGTACGGATTGGTGGCTTCACAATATGGAGATATTAATCAAAGGCTGGAATCCACTGATGGCACTACAACTGTGGAAGGCTTTGTGAGAAGTTACTTTGGCTTCAAGCATGATTTTCTGGGTGTGGTTGCAGCTGTTATGGTTGCATTCCCTGTTGTCTTTGCATTGGTCTTTGCCTTATCAGTGAAGATGTTTAATTTTCAAAGGCGTTAA 4272 0.4178 MEGGGSFRIGSSSIWRNSDAEIFSNSFHQEDDEEALKWAAIQKLPTVSRLRKALLTSSEGEASEIDVQKLGLQEKRALLERLVRIAEEDNEKFLLKLRDRIDRVGIDLPTIEVRFENLNIEAEAHVGTRALPTFTNFMVNIVEGLLNSLHILPNKKQHVNILQDVSGIIKPGRMTLLLGPPSSGKTTLLLALAGKLDPKLKFSGKVTYNGHGMNEFVPQRTAAYVNQTDLHVGEMTVRETLAFSARVQGVGPRYDLLAELSRREKEANIKPDPDIDVYMKAIATEGQKANLITDYVLRILGLEVCADTFVGNAMLRGISGGQRKRVTTGEMLVGPAKALFMDEISTGLDSSTTFQIVNSLKQYVHILKGTEVISLLQPAPETYNLFDDIILLSDSHIVYQGPREHVLEFFESMGFKCPERKGVADFLQEVTSRKDQEQYWTQKDVPYRFITAKEFSEAHQSFHVGRSLGEELATEFDKSKSHPAALTTKKYGVGKWELLKACLSREYLLMKRNSFVYTFKLCQLAVLAIIAMTIFLRTEMHRDSVTHGGIYSGALFYGVVVIMFNGLAELSMVVSRLPVFYKQRDYLFFPSWVYALPAWILKIPMTFVEVGVWVFLTYYVIGFDPYVGRLFRQYLILVLVNQMASALFRFIAAIGRDMTVALTLGSFTLAILFSMSGFLLSKDNIKKWWLWGFWISPMMYGQNAMVNNEFLGDRWRHVLPNSIEPLGVEVLKSRGFFTQSYWYWIGVGALAGYTLLFNFGYMLALTFLNPIGKHQAVISEEAQSNEQNGGSTKGTNVQETVAEETNHNNRKRGMVLPFEPHSITFDEVTYSVDMPQEMRNRGVAEDKLVLLKGVSGAFRPGVLTALMGVTGAGKTTLMDVLAGRKTGGYIGGNISISGYPKKQETFARISGYCEQNDIHSPHVTVYESLLYSAWLRLSPDISAETRKMFIDEVMELVELKPLRNALVGLPGVNGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFESFDELLLMKQGGQEIYVGPLGHHSSHLISYFEGIQGVNKIKDGYNPATWMLEVSTSAKEMELGIDFAEVYKNSELYRRNKALIKELSSPAPGSQDLYFPSQYSTSFFTQCMACLWKQHWSYWRNPLYTALRFLYSTAVAVLLGSMFWNLGSKIEKQQDLFNAMGSMYAAVLLIGIKNANAVQPVVSVERTVFYREKAAGMYSALPYAFAQVLIELPYVLVQAVVYGIIIYAMIGFEWTVTKVFWYLFFMYFTFLYFTYYGMMSVAVTPNQHISSIVSSAFYSVWNLFSGFIVPRPRIPVWWRWYSWGNPVAWSLYGLVASQYGDINQRLESTDGTTTVEGFVRSYFGFKHDFLGVVAAVMVAFPVVFALVFALSVKMFNFQRR* 1424
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr4g0077 1423 Gene3D - 148 459 IPR027417 -
Apr4g0077 1423 PANTHER ATP-BINDING CASSETTE TRANSPORTER 1 1423 - -
Apr4g0077 1423 Pfam ABC-transporter N-terminal 73 137 IPR029481 -
Apr4g0077 1423 CDD ABCG_PDR_domain1 161 401 IPR034001 -
Apr4g0077 1423 Pfam Plant PDR ABC transporter associated 715 778 IPR013581 -
Apr4g0077 1423 Pfam ABC transporter 851 1003 IPR003439 GO:0005524
Apr4g0077 1423 Pfam ABC transporter 162 344 IPR003439 GO:0005524
Apr4g0077 1423 PANTHER DRUG RESISTANCE TRANSPORTER-LIKE ABC DOMAIN PROTEIN 1 1423 - -
Apr4g0077 1423 Coils Coil 72 92 - -
Apr4g0077 1423 Pfam ABC-2 type transporter 377 475 IPR043926 GO:0140359
Apr4g0077 1423 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 88 199 IPR027417 -
Apr4g0077 1423 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 146 419 IPR003439 GO:0005524
Apr4g0077 1423 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 838 1059 IPR027417 -
Apr4g0077 1423 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 823 1075 IPR003439 GO:0005524
Apr4g0077 1423 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 158 419 IPR027417 -
Apr4g0077 1423 Gene3D - 825 1066 IPR027417 -
Apr4g0077 1423 SMART AAA_5 171 396 IPR003593 -
Apr4g0077 1423 SMART AAA_5 860 1052 IPR003593 -
Apr4g0077 1423 CDD ABCG_PDR_domain2 820 1058 IPR034003 -
Apr4g0077 1423 Pfam ABC-2 type transporter 498 710 IPR013525 GO:0016020|GO:0140359
Apr4g0077 1423 Pfam ABC-2 type transporter 1148 1362 IPR013525 GO:0016020|GO:0140359
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr4g0077 Apr-Chr4 663489 670903 Dispersed/Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr4g0077 K08711 - gmx:732607 2589.3