Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr4g0075 ATGGCAAACAATGGAGTGTCAGCTACAGCGTTGTCTTCTTCTTCAGGATCGTCGAATACCCTTTGGAGTGAGATCCTTGGATTGCCCATGTTGGAATTGGTGGCAATCTGTGGCAACTTGATTATGTTTCTTCTCTTTCTCTTTGTTGTTTCTGCGAGGAAGATGGTTGTGTTGGATGGAGGAAGAATTAGATTTGGCAAGGAGAATAGACCCAGTAATGGCAGCCCAATTTGTGTTAGTGTTGATGGGGGAGCACGTGACATTAGAATTGGTTCATGGTTCAAGTTGTCGATGTTGTCTTGTTTCTATGTTCTGTTGGTGCAAGTTTTGGTGTTGGGATTCGATGGGGTTGTGTTGATTAAGGGTGGTGTGGACGTGAGTTTGTCTCTTATTGCTGTGCCTCTTGCTCAGGTTTTAGCTTGGGTTGTGTTGAGCTTCTCGGCCTTGCATTGTAAATTCAAGGTGTGTGAAAAGTTTCCAATTTTGTTGAGAGTTTGGTGGTTTGTGTTGTTTGTTATTTGCTTGTGTACTTTGTATGTTGATGGGAGGGGGGTTTGGATGGAAGGTTCCAAGCACCTACGTTCTCATGTTGTGGCAAATTTTGCTGTGACTCCTGCTCTTGCTTTCTTGTGTATTGTTGCAATTAGGGGTGTTACTGGCATAAAAGTTAGTAGGAACTCAGAGCTTCAACAACCGTTACTTGACGAAGAAGAACCAGGGTGTCTCAAGGTTACTCCTTATAGTGATGCCCGGCTTTTTAGTTTGGCTACTCTGTCTTGGTTGAATGCACTTCTTTCCATTGGTGCAAAGAGACCGCTTGAGCTTAAGGACATTCCCCTTGTTGCGCCAAAAGATCGAGCCAAGACTAATTATAAGGCTTTGAATTCTAATTGGGAGAGATTGAAGGCTGAAAACCCGACAAGGCAGCCTTCGTTAGCTTGGGCACTTCTCAAATCATTCTGGAAGGAGGCAGCTTGTAATGCCATATTTGCTGGGGTCACTACACTTGTCTCATATGTTGGTCCATTTATGATAAGTTACTTTGTCGATTACTTGGTTGGCAAAGAGATTTTCCCTAATGAGGGGTATGTCCTTGCGGGGATATTCTTTGTGGCCAAGCTTGTAGAGACCTTCACCACTAGGCAGTGGTATTTAGGGGTGGACATCTTGGGTATGCATGTTAGGTCAGCTTTAACAGCGATGGTGTATAGAAAAGGGCTTAGGCTATCAAGCTTGGCCAAGCAAAGTCACACAAGTGGGGAGATTGTTAACTACATGGCTGTTGACGTTCAGAGGGTAGGGGACTACTCTTGGTATCTTCATGACATGTGGATGCTTCCTTTGCAGATTGTTCTTGCCCTTGCGATTTTGTATAAGAATGTTGGAATTGCTTCTATTGCGACATTGATTGCTACAATCATTTCCATTGTTGTCACCATACCTGTGGCCAGAATCCAAGAAGATTATCAAGACAAGTTAATGGCTGCTAAGGATGAAAGGATGAGAAAAACATCCGAGTGCCTGAGAAATATGAGGATTCTCAAGCTGCAAGCTTGGGAGGACAGATATAGAATAAGGTTGGAGGAAATGCGTGGAGTAGAGTTCGGTGGCCATCTGACTGCAGGTGGTGTACTTTCTGCATTAGCTACTTTCAGGATCCTACAAGAACCTTTGAGGAATTTTCCAGACTTGGTGTCAACTATGGCTCAGACAAAGGTTTCTCTTGATCGATTATCTGCCTTCCTGCTGGAGGAAGAATTGCAGGAGGATGCAACTATTGTCTTGCCACAAGGCATTACTAACATTGCTATAGAAATTAAGCATGGTTTCTTCTGTTGGGACCCTTCGTCGTCTGCTAGGCCTACCCTATCAGAGATAAATATGAAAGTTGAAAGAGGGATGCGTGTGGCTGTTTGTGGTATGGTTGGTTCAGGGAAATCAAGTTTTCTTTCTTGCATCCTTGGAGAGATTCCTAAACTTTCTGGTGAAGTCAGAGTGTGTGGCTCTGCTGGATATGTCTCCCAGTCAGCATGGATACAATCAGGAAATATAGAAGAAAATATCCTCTTTGGAAGCCCAATGGACAAAGCAAAGTATAAGAATGTTCTTCATGCGTGTTCACTGAAAAAGGACCTAGAACTTTTCTCACATGGCGATCAGACAATTATTGGGGACAGAGGCATAAACCTGAGTGGTGGCCAGAAGCAGCGGGTTCAGCTTGCACGAGCACTCTACCAGGATGCAGATATTTATCTCCTTGATGATCCCTTCAGCGCAGTTGATGCTCACACTGGATCAGAATTATTTAGGGAGTATATATTGACAGCACTAGTAGATAAAACAGTCATTTTTGTGACCCATCAAGTTGAATTCCTTCCTGCTGCTGATTTGATACTGGTTCTGAAGGAAGGCTGCATCATACAGGCAGGAAAGTACGATGATCTTTTACAAGCAGGAACAGATTTTAAAACTCTGGTTTCAGCTCATCATGAAGCCATCGAAGCTATGGATATCCCTACTCATTCCTCTGAAGATTCAGATGAAAACATATCCTTGGATGCATCTGTTATGATCAGTAAGAAATCCATTTGTTCTGCAAATGATATTGATAATTTGGCAAAGGAAGTGCAGGAAGGATCATCAACTTCAGATCAAAAAGCATATACGGAGAAGAAGAAAGCAAAACGGTCAAGAAAAAAACAGCTTGTTCAGGAAGAGGAGAGGGTCAGAGGTAGAGTCAGCATGAAGGTGTATTGGTCATACATGGCAGCTGCTTATAAAGGCTTATTGATTCCACTCATAATCATTGCACAAGGATTATTTCAGTTCCTTCAGATTGCTAGTAATTGGTGGATGGCTTGGGCTAACCCTCAAACAGAAGGAGACCAGCCCAAAGTAACTCCCACGGTTCTTCTTCTTGTTTACATGGCTCTTGCTTTTGGCAGTTCATGGTTTATATTTATAAGGGCTGTTCTGGTGGCTACATTTGGTCTTGCAGCTGCACAGAAGCTATTTTTGAAGATGCTTAGAAGTGTGTTCCATGCACCAATGTCTTTCTTTGATTCTACACCAGCTGGAAGGATCTTGAATCGAGTATCAGTTGATCAAAGTGTAGTGGATCTAGACATTCCTTTTAGGCTGGGTGGGTTTGCTTCAACAACAATACAGCTTATTGGTATTGTTGGTGTAATGACAGAAGTTACATGGCAAATTTTGCTCTTAGTTGTTCCAATGGCCATCGCTTGTTTGTGGATGCAGAAATACTACATGGCTTCCTCAAGGGAACTGGTCCGAATTGTAAGCATCCAGAAATCTCCAATTATACATCTTTTTGGTGAATCGATTGCTGGAGCATCCACCATAAGAGGTTTTGGACAAGAAAAAAGGTTCATGAAGCGGAACCTATATCTTCTTGATTGCTTTGCACGTCCATTCTTCTGCAGTCTTGCTGCTATTGAGTGGCTCTGCCTGCGGATGGAGTTACTTTCAACCTTTGTATTTGCTTTCTGCATGGTATTGCTTGTGAGCTTTCCCCGTGGGAGTATTGACCCAAGCATGGCTGGACTTGCTGTGACATATGGCCTGAATTTAAATGCACGCTTATCAAGGTGGATACTCAGCTTTTGCAAACTTGAAAATAAAATTATATCTATTGAAAGAATTTACCAGTACAGCCAAATTCCTAGCGAAGCACCAACAATAATTGAAAATTCTCACCCTCCATCCTCATGGCCAGAAAACGGGGAAATTGAAATAATTGATTTGAAGGTCCGTTACAAGGAGAATCTTCCTTTGGTGCTTCATGGAGTATCCTGTAAATTTCCTGGTGGAAAGAAGATTGGAATAGTTGGACGTACTGGAAGTGGAAAATCTACCTTAATTCAAGCGTTGTTTCGATTGATTGAACCAGCAAATGGAAGTATCCTTATAGACAACATTAATATTTCAGATATTGGCCTTCATGACCTTCGAAGCCATCTCAGTATCATACCACAAGATCCAACCTTATTTGAAGGGACCATTCGAGGCAACCTTGATCCTCTTGAGGAACACTCAGATAAAGATATTTGGGAGGCACTTGATAAGTCTCAGCTTGGAGATATTATCCGTGAGAAAGGACAAAAGCTTGATACACCAGTTCTAGAAAATGGAGATAACTGGAGTGTAGGACAGCGGCAACTCGTTTCTCTTGGCCGTGCTCTACTGAAGCAGTCAAAAATACTTGTACTTGATGAAGCTACGGCATCGGTTGATACTGCCACTGATAATCTTATCCAGAAGATTATCCGAAAGGAGTTCAAAGACTGCACTGTGTGCACCATTGCACATCGTATTCCTACTGTCATCGACAGTGATCTAGTTCTGGTGCTCAGTGACGGGCGAGTTGCAGAGTTTGACACCCCTTCAAGACTATTAGAGGAAAAGTCATCGATGTTTCTAAAACTGGTGACGGAGTATTCATCACGTTCGAGTGGTATACCGGAAATTTAG 4491 0.4262 MANNGVSATALSSSSGSSNTLWSEILGLPMLELVAICGNLIMFLLFLFVVSARKMVVLDGGRIRFGKENRPSNGSPICVSVDGGARDIRIGSWFKLSMLSCFYVLLVQVLVLGFDGVVLIKGGVDVSLSLIAVPLAQVLAWVVLSFSALHCKFKVCEKFPILLRVWWFVLFVICLCTLYVDGRGVWMEGSKHLRSHVVANFAVTPALAFLCIVAIRGVTGIKVSRNSELQQPLLDEEEPGCLKVTPYSDARLFSLATLSWLNALLSIGAKRPLELKDIPLVAPKDRAKTNYKALNSNWERLKAENPTRQPSLAWALLKSFWKEAACNAIFAGVTTLVSYVGPFMISYFVDYLVGKEIFPNEGYVLAGIFFVAKLVETFTTRQWYLGVDILGMHVRSALTAMVYRKGLRLSSLAKQSHTSGEIVNYMAVDVQRVGDYSWYLHDMWMLPLQIVLALAILYKNVGIASIATLIATIISIVVTIPVARIQEDYQDKLMAAKDERMRKTSECLRNMRILKLQAWEDRYRIRLEEMRGVEFGGHLTAGGVLSALATFRILQEPLRNFPDLVSTMAQTKVSLDRLSAFLLEEELQEDATIVLPQGITNIAIEIKHGFFCWDPSSSARPTLSEINMKVERGMRVAVCGMVGSGKSSFLSCILGEIPKLSGEVRVCGSAGYVSQSAWIQSGNIEENILFGSPMDKAKYKNVLHACSLKKDLELFSHGDQTIIGDRGINLSGGQKQRVQLARALYQDADIYLLDDPFSAVDAHTGSELFREYILTALVDKTVIFVTHQVEFLPAADLILVLKEGCIIQAGKYDDLLQAGTDFKTLVSAHHEAIEAMDIPTHSSEDSDENISLDASVMISKKSICSANDIDNLAKEVQEGSSTSDQKAYTEKKKAKRSRKKQLVQEEERVRGRVSMKVYWSYMAAAYKGLLIPLIIIAQGLFQFLQIASNWWMAWANPQTEGDQPKVTPTVLLLVYMALAFGSSWFIFIRAVLVATFGLAAAQKLFLKMLRSVFHAPMSFFDSTPAGRILNRVSVDQSVVDLDIPFRLGGFASTTIQLIGIVGVMTEVTWQILLLVVPMAIACLWMQKYYMASSRELVRIVSIQKSPIIHLFGESIAGASTIRGFGQEKRFMKRNLYLLDCFARPFFCSLAAIEWLCLRMELLSTFVFAFCMVLLVSFPRGSIDPSMAGLAVTYGLNLNARLSRWILSFCKLENKIISIERIYQYSQIPSEAPTIIENSHPPSSWPENGEIEIIDLKVRYKENLPLVLHGVSCKFPGGKKIGIVGRTGSGKSTLIQALFRLIEPANGSILIDNINISDIGLHDLRSHLSIIPQDPTLFEGTIRGNLDPLEEHSDKDIWEALDKSQLGDIIREKGQKLDTPVLENGDNWSVGQRQLVSLGRALLKQSKILVLDEATASVDTATDNLIQKIIRKEFKDCTVCTIAHRIPTVIDSDLVLVLSDGRVAEFDTPSRLLEEKSSMFLKLVTEYSSRSSGIPEI* 1497
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr4g0075 1496 PANTHER MULTIDRUG RESISTANCE PROTEIN ABC TRANSPORTER FAMILY PROTEIN 536 1495 - -
Apr4g0075 1496 PANTHER MULTIDRUG RESISTANCE PROTEIN ABC TRANSPORTER FAMILY PROTEIN 82 535 - -
Apr4g0075 1496 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 600 827 IPR027417 -
Apr4g0075 1496 Pfam ABC transporter 1267 1415 IPR003439 GO:0005524
Apr4g0075 1496 Pfam ABC transporter 623 757 IPR003439 GO:0005524
Apr4g0075 1496 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 328 531 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Apr4g0075 1496 ProSitePatterns ABC transporters family signature. 730 744 IPR017871 GO:0005524
Apr4g0075 1496 SMART AAA_5 632 813 IPR003593 -
Apr4g0075 1496 SMART AAA_5 1276 1461 IPR003593 -
Apr4g0075 1496 Gene3D ABC transporter type 1, transmembrane domain 313 580 IPR036640 GO:0005524|GO:0016021
Apr4g0075 1496 Gene3D ABC transporter type 1, transmembrane domain 892 1231 IPR036640 GO:0005524|GO:0016021
Apr4g0075 1496 SUPERFAMILY ABC transporter transmembrane region 313 584 IPR036640 GO:0005524|GO:0016021
Apr4g0075 1496 Gene3D - 581 850 IPR027417 -
Apr4g0075 1496 CDD ABC_6TM_ABCC_D1 326 578 IPR044746 GO:0140359
Apr4g0075 1496 SUPERFAMILY ABC transporter transmembrane region 919 1230 IPR036640 GO:0005524|GO:0016021
Apr4g0075 1496 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 604 828 IPR003439 GO:0005524
Apr4g0075 1496 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 933 1203 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Apr4g0075 1496 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1240 1480 IPR027417 -
Apr4g0075 1496 CDD ABC_6TM_ABCC_D2 931 1225 IPR044726 GO:0140359
Apr4g0075 1496 CDD ABCC_MRP_domain1 604 804 - -
Apr4g0075 1496 Gene3D - 1233 1486 IPR027417 -
Apr4g0075 1496 MobiDBLite consensus disorder prediction 876 901 - -
Apr4g0075 1496 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 1250 1484 IPR003439 GO:0005524
Apr4g0075 1496 PANTHER ATP-BINDING CASSETTE SUB-FAMILY C 536 1495 - -
Apr4g0075 1496 PANTHER ATP-BINDING CASSETTE SUB-FAMILY C 82 535 - -
Apr4g0075 1496 Pfam ABC transporter transmembrane region 935 1175 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Apr4g0075 1496 Pfam ABC transporter transmembrane region 329 529 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Apr4g0075 1496 Coils Coil 284 304 - -
Apr4g0075 1496 CDD ABCC_MRP_domain2 1248 1468 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr4g0075 Apr-Chr4 637628 647139 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr4g0075 604 821 Calmodulin-binding Proteins AT2G36910 30.342 1.07e-19 94.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr4g0075 - - gmx:100790550 2610.48
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr4g0075 4 637628 647139 Apr4g0075 4 637628 647139 ECH
Apr4g0075 4 637628 647139 Apr8g0371 8 3113561 3122909 PCT