Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr4g0068 ATGCTGCTAAGAAGCTCTTCAACTCCAGTTCTTGGTTCTCTCCTCTCTTCATTCACAGATAGTCCTAGTAATAACATTCACTCTGAAACCAGCCATGCAGTCAAGCATCTACCACCAACTAGTGTCCCCCAACATTATCATAAACTTTCTATCCATCCAATTCTCTCTTCATTCTCATGTGGGTCTTCTCCAATCTCTCCCTCTATTGCTGAACTTGAACGCCAAAACAAAAGCTTTAGAAGAGTTCAATCTGAAGGGAACTTGCAAGATTTGGCCTTTTCTTCTTGCAACAACAACGAAGACAGATTCGAGTATTCAGATCCTCCAAAGTGGTTTTCAGCTAGAAACAGGTGCTTGGTGCTGGAGACTATTCCTTCTGTCTCTACTGGAAAGGGAAAAGGCTTGAGTGAAGAAGAGGAAGACGAAGAAACAGAAAGTGACATTGAATATGAGGAAAGAGGAGGAGGGTTGAGGGAAAACCAAAGAAAAGATGACGGGTTTAGTGTGGTGAATAGAGGCAATGATATGATACTGAGTGAAGAAGTGAGAGTGAAGGATGGAGTTTGCAGGGTGAGTTTTGGTGACCAAGAGGTTGGTAGTGATAAAGAAATGTTTCTTGCAAAGGGGCTTGGGGTAGATGTCTGTGGTGATGGCATAGGTGGCTGCATAGGTGGTGGTGGAGGCAGTGGAGGTGATGATCATAACCACATGGGTTCTGGAGGGCATGATGGAGATAGGCAAGGAGTGGAAGAATATTACAAAAGAATGGTGAAGGAAAATCCTTGTAATCCGTTGTTTCTGAGGAATTATGCCAATTTTTTGTATCAGTGCAAACAAGACCGTGAAGGAGCAGAGGAGTATTATTCCCGTGCCATACTAGCGGACCCAAATGATGGAGAAGTTCTATCACAATATGGAAAGCTAGTTTGGGAGCTACATCACGACCAAGAACGAGCCTCCACCTATTTTGAAAGAGCAGTTCAAGCCTCTCCCGAAGACAGCCATGTACAAGCAGCATATGCTAGTTTCCTTTGGGACACAGAGGATGATAGCAATGAACCACAATGTTTACCACATTCTCATCAGGGAGCTATGGCTACTGCTGGTGCTTAG 1113 0.4403 MLLRSSSTPVLGSLLSSFTDSPSNNIHSETSHAVKHLPPTSVPQHYHKLSIHPILSSFSCGSSPISPSIAELERQNKSFRRVQSEGNLQDLAFSSCNNNEDRFEYSDPPKWFSARNRCLVLETIPSVSTGKGKGLSEEEEDEETESDIEYEERGGGLRENQRKDDGFSVVNRGNDMILSEEVRVKDGVCRVSFGDQEVGSDKEMFLAKGLGVDVCGDGIGGCIGGGGGSGGDDHNHMGSGGHDGDRQGVEEYYKRMVKENPCNPLFLRNYANFLYQCKQDREGAEEYYSRAILADPNDGEVLSQYGKLVWELHHDQERASTYFERAVQASPEDSHVQAAYASFLWDTEDDSNEPQCLPHSHQGAMATAGA* 371
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr4g0068 370 SUPERFAMILY TPR-like 245 349 IPR011990 GO:0005515
Apr4g0068 370 SMART hat_new_1 314 346 IPR003107 GO:0006396
Apr4g0068 370 SMART hat_new_1 279 311 IPR003107 GO:0006396
Apr4g0068 370 SMART hat_new_1 244 276 IPR003107 GO:0006396
Apr4g0068 370 MobiDBLite consensus disorder prediction 127 166 - -
Apr4g0068 370 MobiDBLite consensus disorder prediction 150 166 - -
Apr4g0068 370 Gene3D Tetratricopeptide repeat domain 242 356 IPR011990 GO:0005515
Apr4g0068 370 MobiDBLite consensus disorder prediction 20 37 - -
Apr4g0068 370 PANTHER OSJNBA0004N05.2 PROTEIN 1 355 - -
Apr4g0068 370 MobiDBLite consensus disorder prediction 351 370 - -
Apr4g0068 370 MobiDBLite consensus disorder prediction 20 39 - -
Apr4g0068 370 PANTHER TETRATRICOPEPTIDE REPEAT PROTEIN 5 1 355 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr4g0068 - - aprc:113861229 679.093
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr4g0068 4 590866 593914 Apr4g0068 4 590866 593914 ECH