Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr4g0065 ATGTCTTTCATTCCAATCTCCCAAATGGGTATGTTCCCTTTTCTTATTCTCTTAACAGTTTCGGTTCCCCTTCTTGATCCTACACTAGCCTCAGCCTTGGACACCACAAACTTGGTGTACAAAGGTTGTGCTGACCAGAAACTACAAGACCCATATTCCCAAAACCTGAAACCGTTGTTAGATTCTCTGGTGGCAGAGTCAGGGCAAAAGGGTTTCGCCGCCACCACCCAGAGCGGCATCACCGGCGTTTACCAATGCAGAGGGGATCTCACCAACTCCGATTGCTACAACTGCGTCAGCAAGATTCCTTCCATGCTGGACAAGCTCTGTGGTGACGTGGCAGCGGCAAGGGTCCAGCTCAGCGGGTGTTACCTCAGGTACGAGGTGGTCGGATTCAAGCAAGTTCCTCAGACTCAGTTGTTGTACAAGGTTTGTGGATCCAAGAAGGTTAGTGACGGTGGTGGGTTTGAAGCGAGGAGGGACTCGGCGTTTGAGATGGTGGAAAATGGTGTTCAAGGTAGTGGAAGCTTGTTTTACACTGGGAGTTATCAGAGTCTCTATGTGTTGGGGCAGTGTGAGGGTGATTTGGGAAATGGGGATTGTGGGGGTTGTATCAAGAGTGCTGAGGAACAGGCTAAGGTTCAGTGTGGTGACTCGATTTCTGCACAAATTTATCTCCAAAATTGTTATATTAGTTATAGCTTTTACCCCAATGGAGTCCCCACCATGTCATCTTCTCCAGGGTCAGGAGGGCATCAACACATTGAGAGGACAGTGGCTCTTGCGGTGGGAGGGGTTGCAGCTGTGGGATTCTTGATTGTTTGTTTGTTGTTTCTCAAATCAGTGTTGAAGAAAAGAGGTGGGAAGCGTCGAGGTTGA 879 0.4892 MSFIPISQMGMFPFLILLTVSVPLLDPTLASALDTTNLVYKGCADQKLQDPYSQNLKPLLDSLVAESGQKGFAATTQSGITGVYQCRGDLTNSDCYNCVSKIPSMLDKLCGDVAAARVQLSGCYLRYEVVGFKQVPQTQLLYKVCGSKKVSDGGGFEARRDSAFEMVENGVQGSGSLFYTGSYQSLYVLGQCEGDLGNGDCGGCIKSAEEQAKVQCGDSISAQIYLQNCYISYSFYPNGVPTMSSSPGSGGHQHIERTVALAVGGVAAVGFLIVCLLFLKSVLKKRGGKRRG* 293
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr4g0065 292 ProSiteProfiles Gnk2-homologous domain profile. 138 238 IPR002902 -
Apr4g0065 292 Pfam Salt stress response/antifungal 47 128 IPR002902 -
Apr4g0065 292 Pfam Salt stress response/antifungal 149 235 IPR002902 -
Apr4g0065 292 Gene3D - 137 237 IPR038408 -
Apr4g0065 292 Gene3D - 35 132 IPR038408 -
Apr4g0065 292 PANTHER PLASMODESMATA-LOCATED PROTEIN 1 14 287 - -
Apr4g0065 292 ProSiteProfiles Gnk2-homologous domain profile. 34 132 IPR002902 -
Apr4g0065 292 PANTHER ANTIFUNGAL PROTEIN GINKBILOBIN-2-LIKE 14 287 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr4g0065 Apr-Chr4 567689 568950 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr4g0065 22 291 Receptor kinase-like Gene Family AT5G40380 23.214 7.96e-11 60.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr4g0065 - - gmx:100786830 435.647
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr4g0065 4 567689 568950 Apr4g0065 4 567689 568950 ECH
Apr4g0065 4 567689 568950 Apr8g0364 8 3072274 3074622 PCT