Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr4g0062 ATGGCCAATTTTCTGGCACTCTCACTAATAATTTCAAACCTCTTCATTGGCTTAGTGAGTGCTGATTGGAACATATTGAACCAAAGATTGAGAAAAGGAGTTGAAGCCAACTTGAAGAACTATTGCGAGAGTTGGAGGATCAATGTAGAGCTAAACAACATTAGGGGGTTCAGTGTTGTGCCTCAAGAATGTGTGGAGCACGTGAAGAAATACATGACTTCATCTCAGTACAAATCTGACTCCTTTAGGGCAGTGGAGGAGGTCAGGCTCTATTTGAGTGGATGCTGCACTTTTAAAGGTGATGGCAAAGATTCTTGGATTTTTGATATTGATGAGACCCTTTTGTCCAAAATTCCTTATTATAAGAACCATGGTTTTGGGGGAGAAAAGCTAAATGGGACATCTTTAGAAGAATGGATGAAGCAAAGTAAGGCGCCGGCTCTAGATCACACACTTGAGCTCTTCCATGAAATCAAGAACAAAGGAATCAATATCTTTCTAATTTCTTCAAGAAAGGAAACCCTTAGATCTCCTACTGTAGACAACCTTGTGAAAGTTGGTTACCATGGATGGACTCGTCTTTCATTGAGGGGTCTTGAAGATGAATTACTGGAAGTAAGAAAATACCATTCCAAGGTAAGGCAACAATTGGTTGATGAAGGTTACCGCATTTGGGGTATTGTAGGAGACCAATGGAGCAGCTTTGAGGGTCTTCCAATGGCAAAGAGAACATTTAAGCTACCCAATTCCATATACTATATTGCATAA 768 0.4023 MANFLALSLIISNLFIGLVSADWNILNQRLRKGVEANLKNYCESWRINVELNNIRGFSVVPQECVEHVKKYMTSSQYKSDSFRAVEEVRLYLSGCCTFKGDGKDSWIFDIDETLLSKIPYYKNHGFGGEKLNGTSLEEWMKQSKAPALDHTLELFHEIKNKGINIFLISSRKETLRSPTVDNLVKVGYHGWTRLSLRGLEDELLEVRKYHSKVRQQLVDEGYRIWGIVGDQWSSFEGLPMAKRTFKLPNSIYYIA* 256
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr4g0062 255 PIRSF VSP 1 255 IPR014403 -
Apr4g0062 255 CDD HAD_VSP 68 254 - -
Apr4g0062 255 TIGRFAM plant-AP: plant acid phosphatase 31 255 IPR010028 GO:0003993
Apr4g0062 255 Pfam HAD superfamily, subfamily IIIB (Acid phosphatase) 36 254 IPR005519 -
Apr4g0062 255 PANTHER ACID PHOSPHATASE 1 1 254 - -
Apr4g0062 255 Gene3D - 37 255 IPR023214 -
Apr4g0062 255 SUPERFAMILY HAD-like 97 241 IPR036412 -
Apr4g0062 255 PANTHER ACID PHOSPHATASE-LIKE PROTEIN 1 254 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr4g0062 Apr-Chr4 542669 545182 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr4g0062 - - gmx:100785781 440.654
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr4g0062 4 542669 545182 Apr4g0062 4 542669 545182 ECH