Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr4g0056 ATGGCAGTGGTAGAAGAAAAAGCTCTCACAAGTGGAAGAGAAGATTACACTCAAGATGGCACGATGGACCTCAATGGTAGACCCGTTTTAAGATCAAATACTGGAAAATGGAGAGCTTGTTCCTTCATAGTTGGGTATGAAATGATTGAAAGAATGGCATTCTATGGGATATCATCAAACTTAGTGATGTATCTAACAACGAAGCTCCACGAAGGCACAGTGGAATCTTCAAACCACGTTACCAATTGGGTGGGTACAGTGTGGATTATGCCAGCTGCTGGGGCTTACATAGCTGATGCCTATCTAGGCCGATATTGGACCTTCATATTAGCGTCAGCCATTTACCTTCTAGGAATGTGTTTGTTGACCCTAGCAGTATCAGTAGCAGCATTGAGACCACCACCATGTGATCCAGGTATAGCAAACAAAGATTGCCAAAGAGCATCCTCATTGCAAGTGGGAATTTTCTTCTTTGCCTTGTACATCATTGCAGCAGGCACAGGAGGAACCAAGCCCAACATTTCTACTATGGGAGCAGACCAGTTTGATGAGTTTGAGCCCAAAGAGAGGGCCCAGAAGCTTTCCTTTTATAATTGGTGGGTAGTTTATATTTTAATTGGTACCATTTTTGCCCAAACTGCCTTGGTTTATATACAAGACAAGGTGGGCTTTACCCTTGGATATGGGATCCCAACCATTGGGCTTGCCGTTTCAATATTGGTGTTTCTTTTGGGAACTCCACTTTATAGGCATAGATTGCCGTCTGGGAGCCCATTAACAAGGATGGTTCAGGTCCTTGTGGCTGCTGTGAGGAAGTGGAAGGTACATGTCCCAGTTGATCCTAAAGAGCTACATGAGCTTAGCACGGAAGAATATGCAAGTAAGGGGAGAAACAAAATTTATCATAGCTCTTCATTAAGCTTCCTTGACAAAGCCGCAGTGAAGACAAGAGAAACATCACCATGGATGCTTAGTACGGTAACCCAAGTTGAGGAAACCAAGCAAATGATGAAAATGATTCCTATTTTGATGACTACATGCATTCCAAGCACCATAGTAGCTCAAACCAGCACACTCTTTATAAGACAAGGCACCACACTAGACAGGAGAATGGGACCCCATTTTCAAATCCCTCCAGCTTGTCTTATAGCATTTGTAAACATCTTCATGCTCATAAGTGTTGTAATCTATGACCGTCATTTTGTTCCCATCATGAAGCACTACACAAAGAACCCAAGAGGGATCTCATTGTTGCAAAGACTTGGAATTGGCCTTGTGATTCACATCATTATAATGGTCACTGCATGCTTAGTTGAGAGGAAAAGACTAAGTGTTGCCAGAGAAAACCACCTCTTAGGCCAACCTGATACAATTCCTCTCACTATTTTCATCCTTCTCCCTCAGTTTGCTTTGACAGGGATAGCTGATACCTTTGTTGACGTTGCTAAGATTGAGTTCTTCTATGATCAAGCACCAGCAGCTATGAAAAGTCTAGGAACATCGTATTTCACAACCACCTTGAGCATTGGAAATTTTCTTAGTACTTTTGTTCTATCAACAGTTGCTCATCTCACCCGGAGACATGGTCATAAAGCATGGATTTTGGATAATCTAAATGTGTCCCGTTTGGATTATTATTATGCATTCTTGGCCATTTTGAGCGCTATCAACTTCCTTTGCTTTGTGCTTGTTGCCAAGTTCTTTGTCTATAATGATGATGTTACACAAACCAAAATGCACTTGGATATGAAACCTGCTTCTTCTCAGAACAACACTGGAATAAGCCAAAGAACCCCACAACCAGATTCCCAGTCCTAG 1818 0.4219 MAVVEEKALTSGREDYTQDGTMDLNGRPVLRSNTGKWRACSFIVGYEMIERMAFYGISSNLVMYLTTKLHEGTVESSNHVTNWVGTVWIMPAAGAYIADAYLGRYWTFILASAIYLLGMCLLTLAVSVAALRPPPCDPGIANKDCQRASSLQVGIFFFALYIIAAGTGGTKPNISTMGADQFDEFEPKERAQKLSFYNWWVVYILIGTIFAQTALVYIQDKVGFTLGYGIPTIGLAVSILVFLLGTPLYRHRLPSGSPLTRMVQVLVAAVRKWKVHVPVDPKELHELSTEEYASKGRNKIYHSSSLSFLDKAAVKTRETSPWMLSTVTQVEETKQMMKMIPILMTTCIPSTIVAQTSTLFIRQGTTLDRRMGPHFQIPPACLIAFVNIFMLISVVIYDRHFVPIMKHYTKNPRGISLLQRLGIGLVIHIIIMVTACLVERKRLSVARENHLLGQPDTIPLTIFILLPQFALTGIADTFVDVAKIEFFYDQAPAAMKSLGTSYFTTTLSIGNFLSTFVLSTVAHLTRRHGHKAWILDNLNVSRLDYYYAFLAILSAINFLCFVLVAKFFVYNDDVTQTKMHLDMKPASSQNNTGISQRTPQPDSQS* 606
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr4g0056 605 MobiDBLite consensus disorder prediction 582 605 - -
Apr4g0056 605 Gene3D MFS general substrate transporter like domains 8 577 IPR036259 -
Apr4g0056 605 CDD MFS_NPF5 37 570 IPR044739 GO:0042937|GO:0042938|GO:0071916
Apr4g0056 605 PANTHER OLIGOPEPTIDE TRANSPORTER-RELATED 19 586 IPR000109 GO:0016020|GO:0022857|GO:0055085
Apr4g0056 605 Pfam POT family 105 534 IPR000109 GO:0016020|GO:0022857|GO:0055085
Apr4g0056 605 SUPERFAMILY MFS general substrate transporter 28 567 IPR036259 -
Apr4g0056 605 PANTHER PEPTIDE TRANSPORTER 19 586 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr4g0056 Apr-Chr4 504152 507825 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr4g0056 14 577 Organic Solute Cotransporters AT5G46040 57.597 0.0 668
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr4g0056 - K14638 gmx:100787001 1040.02
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr4g0056 4 504152 507825 Apr4g0056 4 504152 507825 ECH
Apr4g0056 4 504152 507825 Apr8g1044 8 13476523 13483565 PCT