Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr4g0052 ATGGTCAGAGTCACGCTTATTTCCTCCCTCCACCACCCTCTCTCTCACTCTCTCGTAACCGAAATGGAGAAAAAACCGTTGCTCTGCTTTTACGTCCTCCTCCCTGTTCTCGCCATTGCTGGAGCTTCCTCCTCTGAGGTCGACTACTCCAAGCTCTCCGGCATTATAATTCCGGGCTTTGCATCTACTCAGCTCCGAGCATGGTCCATTCTCGACTGCCCCTACTCCCCACTCGATTTCAACCCTCTCGATTTGGTTTGGCTCGACACCACCAAAGTCCTTTCTGCTGTCAATTGCTGGCTCAAGTGCATGGTGTTGGACCCTTACAACCAGACAGATCACCCTGATTGTAAGTCCCGTCCCGATAGTGGTCTTTCTGGTATTACAGAACTTGATCCAGGTTATATAACAGGACCGCTTTCTTCGGTGTGGAAAGAATGGATTAAGTGGTGTATTGAATTTGGCATAGAAGCTAATGCAATAATTGCTGTTCCTTATGATTGGAGATTGGCACCCTCCATGCTTGAAAAGCGTGACCTTTACTTTCATAAGCTGAAATTGACATTTGAAACTGCTTTTAAACTTCGTGGTGGCCCTTCCTTAGTTTTTGCCCATTCATTGGGTAATCATGTTTTTCGTTATTTCTTGGAGTGGCTGAAGCTACAAATTCCACCAAAACATTATATCAAATGGCTGGATCAACATATTCATGCCTATTTTGCTGTTGGACCTCCCCTTCTTGGTGCAACTGAAACCATTGAAGCAACACTTTCTGGTTTCACATTTGGCCTTCCAGTATCTGAGGGAACAGCTCGATTGATGTTCAACTCCTTTGGTTCATCATTATGGATGATGCCTTTTTCCCAATACTGTAGAACTGATGATAAATATTGGCAGCATTTTTATGGGAAAAGGCCCATGGGTCAGCAAACGTATCACTGTGATGAGCAGGAGTTTCATTCAAACACATCTGGATGGCCAACGAAAATAATCAATATTGAAATTCCCGCAACTCGTGGATTTGATGCATATCCTTCATTCTCAGAAATACCGGAGGCTAACTTGTCCAGCATGGAGTGTAGATTGCCTACTCAATTATCTTTCTCAGCTCGTGAAATATCAGATGGCTCCTTTTTCAAGGCAATTGAAGATTATGACCCAGACAGCAAGAGGCTCTTGTACCAGTTAGAGAAATCATATCTTGATGATCCTGTCGTTAATCCCCTTACACCTTGGGACCGGCCACCAATAAAAAATGTCTTCTGCATTTATGGCACTGATTCGAAGACCAAGGTTGGTTACTACTTTGCCCCTAGTGGCAAGCCCTACCCTGATAACTGGATCATTACAGATGTCATTTATGAGTTTGAAGGATCTCTATTCTCAAGGTCGGGGAATTTGGTTGAAGGGAACCCTGGAGCCATGAGTGGTGATGAGACGGTACCATATCACTCCCTTTCATGGTGCAAGAACTGGCTTGGACCTAGGGTGAACATAACAAGAGCTCCTCAGTCGGAGCATGATGGTTCAGATGTACAGATTAAATTGAATGTGGAACATCACCCAGGAGAAGATATTGTTCCGAACATGAAAAGATCGCCAAAGGTTAAGTACATAACATACTATGAAGATTCTGAAAGTCTTCTTGGAAAGAGGACAGCAGTTTGGGAGCTTGATAAAGCAAATCACAGGAACATTGTTAGATCACCAGTGCTAATGAGGGAATTATGGCTTGAGTTGTGGCATGATACCCATCCTGATGCAAAATCAAATTTTGTCACTAAAGCTAAGCGTGGACCTTTAAGAGACGAGGACTGTTATTGGGATTATGGGAGAGCTCGTTGTGCATGGCCAGATTACTGTGAATACAGGTACATTTTTGGTGATGTTCACTTGGGACAAAGCTGCAGGTTGAAATATACTTCATTTGATTTGTTGTTGCATTATCTGTAA 1953 0.4342 MVRVTLISSLHHPLSHSLVTEMEKKPLLCFYVLLPVLAIAGASSSEVDYSKLSGIIIPGFASTQLRAWSILDCPYSPLDFNPLDLVWLDTTKVLSAVNCWLKCMVLDPYNQTDHPDCKSRPDSGLSGITELDPGYITGPLSSVWKEWIKWCIEFGIEANAIIAVPYDWRLAPSMLEKRDLYFHKLKLTFETAFKLRGGPSLVFAHSLGNHVFRYFLEWLKLQIPPKHYIKWLDQHIHAYFAVGPPLLGATETIEATLSGFTFGLPVSEGTARLMFNSFGSSLWMMPFSQYCRTDDKYWQHFYGKRPMGQQTYHCDEQEFHSNTSGWPTKIINIEIPATRGFDAYPSFSEIPEANLSSMECRLPTQLSFSAREISDGSFFKAIEDYDPDSKRLLYQLEKSYLDDPVVNPLTPWDRPPIKNVFCIYGTDSKTKVGYYFAPSGKPYPDNWIITDVIYEFEGSLFSRSGNLVEGNPGAMSGDETVPYHSLSWCKNWLGPRVNITRAPQSEHDGSDVQIKLNVEHHPGEDIVPNMKRSPKVKYITYYEDSESLLGKRTAVWELDKANHRNIVRSPVLMRELWLELWHDTHPDAKSNFVTKAKRGPLRDEDCYWDYGRARCAWPDYCEYRYIFGDVHLGQSCRLKYTSFDLLLHYL* 651
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr4g0052 650 PANTHER BNAA09G50730D PROTEIN 47 633 - -
Apr4g0052 650 PANTHER LECITHIN-CHOLESTEROL ACYLTRANSFERASE-RELATED 47 633 - -
Apr4g0052 650 Gene3D alpha/beta hydrolase 111 270 IPR029058 -
Apr4g0052 650 Pfam Lecithin:cholesterol acyltransferase 84 520 IPR003386 GO:0006629|GO:0008374
Apr4g0052 650 SUPERFAMILY alpha/beta-Hydrolases 184 494 IPR029058 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr4g0052 38 650 Acyl Lipid Metabolism Gene Families AT1G04010 75.896 0.0 1004
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr4g0052 - - gmx:100806466 1206.05
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr4g0052 4 471519 481167 Apr4g0052 4 471519 481167 ECH