Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr4g0048 ATGGAAGGGAGAGAGAGTTGCCATCCTCTGTTAAGAGGAGGTAGGAAGAGAATAGAGAAAGGTTACAATCATGGGTTATCTACCATTCAGATGGATGTCATGGCTTCCATATGTGATACCCTTTTTCCTTCCCTCAACAAGGATAGTTCAAAGGACCAAGCTTTCTCAGCTTTCTACAATACTTCTGCTTCTCAGTTCCCTTTTCCTGATGAGGCTGCAGAGCTCATGTTCAAGAGGACTGTGCCAGAAGCTTTGTTGTTGGTGAGTTGGGTTCTGTGGATTCTGTCCTTCAGATTGGGGACACTGTTGCTTTGTGGAAGTCTTTGCTTGGAATGGAAGTGGCCTTTCGTTAACAAGTTCTCTGAGATTTCCTTGGAGAAGAGAGAAAAAATTCTGAATCAATGGTCAAGGGAAAAGCGTTGGGTACCCCTGCGGATTGTGTTTGTGCTCATCAAACTTGTTTGCTTCTATAATATCTTCTCAAGGACTGATGTAAATGGGCAAAATCCCGTATGGAAAGCAATTGGATACGAGGTGGACACAAAGGAAAAGTTGACAAGAAAGGAGAGGCCACTCCAGAAGGGATTAGTAGAAACAATGTATGAAACTGATTCTACTTTAATCCAATCCCTCGCTGAAAAAGGCCTAGAAGTCACTGAAGATCTAGAGCAGAACACGTACAAGATCAAATGTGATGCTGTCATTGTCGGGTCTGGTTGTGGGGGAGGAGTTGCAGCTGCAGTTCTGGCAAACTCTGGTCAGAAAGTAATTGTCTTAGAGAAAGGAGAGTATTTTGTTGCCCAAGATTATTCTTCTCTGGAAGGTCCATCCATGGATGAGCTATACGAATCAGGAGGCATTATGCCAAGTCTTGACGGGAAAATGATTATCCTGGCTGGCTCAACAGTGGGTGGAGGCTCAACTATAAATTGGTCTGCATGCATCAAAACACCTGATTCTGTTCTGAGGGAATGGTCTGAAAAATATAAAATCCCACTTTTTGCCAGCTCTGATTATCAATCTGCCATGGACTCTGTCTGCAGAAGGATTGGTGTGACAGAGAAATGCAATAAGGAAAGTTTCCAGAATCAAATTCTTAAACAAGGGTGTGAGAAAATCGGTTTGAAAGTTGAGTCAGTTGCAATAAATTCTTCAGCAGATCACTATTGTGGTTCATGCTGTTATGGTTGTAGAACTGGAGATAAAAAGGGCACTGACTCTACTTGGTTGGTTGATGCTGTAGGCAATGGTGCAGTGATCCTAACTGGATGTAAAGCTGAGAAACTTATACTGGAAGATGGAAATGAGGGAATAAAGAAAAAGAAATGCTTAGGAGTGATTGCCGCAGCAACTTGGAGGAGTAAGGTAACAAAGAAACTCCAAATTGAATCCAACGTAACTATTTCAGCATGTGGCAGTCTCTCTACCCCTCCTCTAATGATTTCTAGTGGTCTGCAAAATCCAAACATTGGAAGGAACCTCCATCTCCACCCTGTTCAATTTGCTTGGGGGTACTTCCCAGAAGACATGACAAACTTGAGTGGTAATAACTATGAGGGGGGGATCATAACTTCAATACACAAGGTTTTTGCAGAGGATTCCACCCCACGAATCATCATAGAAGCACCTGCTCTAGGACCAGCATCATTTTCAGCATTGCTTCCATGGGTTTCAGGGCTTGATGTGAAAGAAAGGATGGTGAAGTATGCAAGAACTGCTAACCTTTTTGCATTGGTGAGAGACCAGGGATCAGGAGAAGTAAAGGGTGAAGGTAGAATAACTTACAGACTTGGCCAAATGGACAAAGAAAATCTTAGAGTTGGATTAAGAAAAGCCTTGAGGATTTTGGTTGCAGCAGGAGCTGTAGAAGTGGGTACATACAGGAGTGATGGCCAAAGAATCAAATGCAGGGGGATCAAGGAGGAAGATTTAGAGGAGTTTCTAGACACAGTCACAGTAGTTGGGGGTCCAAGGTCGAGGAATGAACTCTGGACCTTATTTACTACTGCACATCAGATGACAAGTTGTAGAATGGGTGCCACTGAAGAAGATGGTGCACTCGATGAGAACGGCGAGAGTTGGGAGGCAAAAGGCTTGTATGTGTGTGACGGGAGTGTCTTACCCAGTGCAGTTGGTGTCAACCCCATGGTAACCATTCAGTCCACAGCATACTGTATTGCCAGCAAGATAGCAGAATCACTGAAGAAAGAAAAGCAAAGCAAGAATAATTAA 2232 0.4337 MEGRESCHPLLRGGRKRIEKGYNHGLSTIQMDVMASICDTLFPSLNKDSSKDQAFSAFYNTSASQFPFPDEAAELMFKRTVPEALLLVSWVLWILSFRLGTLLLCGSLCLEWKWPFVNKFSEISLEKREKILNQWSREKRWVPLRIVFVLIKLVCFYNIFSRTDVNGQNPVWKAIGYEVDTKEKLTRKERPLQKGLVETMYETDSTLIQSLAEKGLEVTEDLEQNTYKIKCDAVIVGSGCGGGVAAAVLANSGQKVIVLEKGEYFVAQDYSSLEGPSMDELYESGGIMPSLDGKMIILAGSTVGGGSTINWSACIKTPDSVLREWSEKYKIPLFASSDYQSAMDSVCRRIGVTEKCNKESFQNQILKQGCEKIGLKVESVAINSSADHYCGSCCYGCRTGDKKGTDSTWLVDAVGNGAVILTGCKAEKLILEDGNEGIKKKKCLGVIAAATWRSKVTKKLQIESNVTISACGSLSTPPLMISSGLQNPNIGRNLHLHPVQFAWGYFPEDMTNLSGNNYEGGIITSIHKVFAEDSTPRIIIEAPALGPASFSALLPWVSGLDVKERMVKYARTANLFALVRDQGSGEVKGEGRITYRLGQMDKENLRVGLRKALRILVAAGAVEVGTYRSDGQRIKCRGIKEEDLEEFLDTVTVVGGPRSRNELWTLFTTAHQMTSCRMGATEEDGALDENGESWEAKGLYVCDGSVLPSAVGVNPMVTIQSTAYCIASKIAESLKKEKQSKNN* 744
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr4g0048 743 PIRSF Lg_Ch_AO 14 740 IPR012400 GO:0046577
Apr4g0048 743 Pfam GMC oxidoreductase 592 725 IPR007867 GO:0016614
Apr4g0048 743 PANTHER LONG-CHAIN-ALCOHOL OXIDASE 4 738 - -
Apr4g0048 743 Gene3D - 216 526 IPR036188 -
Apr4g0048 743 PANTHER LONG-CHAIN-ALCOHOL OXIDASE FAO4B 4 738 - -
Apr4g0048 743 Gene3D - 603 742 IPR036188 -
Apr4g0048 743 Pfam GMC oxidoreductase 232 499 IPR000172 GO:0016614|GO:0050660
Apr4g0048 743 SUPERFAMILY FAD/NAD(P)-binding domain 229 736 IPR036188 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr4g0048 Apr-Chr4 442239 446735 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr4g0048 4 739 Acyl Lipid Metabolism Gene Families AT4G28570 58.981 0.0 862
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr4g0048 K17756 - gmx:100808951 1279.23
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr4g0048 4 442239 446735 Apr4g0048 4 442239 446735 ECH